Gene Jann_2002 details

Gene Information

• Locus tag: Jann_2002
• ID: 3934455
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 2004008
• End bp: 2004634
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637904358
• Product: lysine exporter protein LysE/YggA
• Protein accession: YP_509944
• Protein GI: 89054493
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.272931
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.707068
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGACC CTACCGTCTT ACTCACCTAC TCGTTGATCG TTCTAGGCTT TGTTTTTATC 
CCCGGTCCCG CGACGCTATT GACCGTCGCA CGGGCTACCA CTTCAGGGAC AAAAGTTGGC 
ATCGCTACTG GCGCGGGCAT TACAGCTGGC GACTTCCTCC ACACTATTAT GGCAGTTGTC 
GGGATCTCCG CGATCATAGC TGCATCCGCG ACGTTGTTCA CCATCGTGAA GTATCTCGGC 
GCGGCCTATC TCGTATATCT TGGTCTGAAG GCATTTTTCG AGAAAACCTC CGTCGATCTG 
GGTCAAGGGC GTGTTCCAAT CTCTGCGCCT CAAGCGTTCA GACAGGCGAT ATTGGCGGAA 
GTTCTTAACC CTAAGACGGC ACTCTTCTTT CTCGCGTTTC TTCCGCAGTT CGTTGCGCCC 
GAGAAGGGTT TCGTCGTTAT CCAGCTGACC ACTCTCGGCG TAGTCTTTGC ATTGATAGGG 
TTCTTCAGCA CAATCTTGTT TGCTGTCGCG GCTGGTGGCC TCGGAAACTT CCTTCGTCGC 
AATCCAGCAG TTCTAAAATG GCAGGGTAAG GTTGTTGGGA GTATCTACTG CGCTCTGGGC 
GTTCGACTGG CACTGCAAGA ACGGTAA 

 

Protein sequence

MIDPTVLLTY SLIVLGFVFI PGPATLLTVA RATTSGTKVG IATGAGITAG DFLHTIMAVV 
GISAIIAASA TLFTIVKYLG AAYLVYLGLK AFFEKTSVDL GQGRVPISAP QAFRQAILAE 
VLNPKTALFF LAFLPQFVAP EKGFVVIQLT TLGVVFALIG FFSTILFAVA AGGLGNFLRR 
NPAVLKWQGK VVGSIYCALG VRLALQER