| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1946 |
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| Symbol | |
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| ID | 3934397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1937312 |
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| End bp | 1938661 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904300 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_509888 |
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| Protein GI | 89054437 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA TCTATCTGGC GAGCGCCGCC GCGCTCGCTC TCTCTGCCAG TGGCGCGCTT
GCTGATGGCC ATATCAACCA CATTTTCCCC GTGGGTGAGG GCGAGTTCAA CTGGGACAGC
TACACCGCCT ATGCCGATGC CTTTGACCTG TCCGGTCAGG AATTGACGAT GACGGGCCCG
TGGACCGGCG ATGACGCGGA GCTTGTAAAC GCCGTTCTCG ACTATTTCGA AAGTGCGACC
GGCGCGACGG TGCAATATTC CGGCTCCGAC AGCTTTGAAA CGGACATCGT CGTTGCGACG
CAGGCGGGCT CTGCCCCCAA CATCGCGGTG TTCCCGCAGC CCGGCCTGAT GACAGACCTC
GCATCGCGCG GGTTCCTGAC ACCTCTAGCG CCCGAGACCG CCGATTGGGT CCGTGAAAAC
TATGCCGCAG GTGAATCCTG GGTGTCGCTT GGCACCGCAG CCAACGCCGC CGGTGAAGAG
GCGCTGTACG GTTTCTTCTA CAAGGTCGAT CTGAAATCCC TGGTCTGGTA TTCGCCCGAG
GCGTTTGACG AGGCGGGCTA TGACATCCCC GAGACGATGG AAGACCTGCT GGCGCTCAAC
GATCAGATCG TCGAAGACGG CGCGACGCCA TGGTGTATCG GTCTGGGATC AGGTGGTGCC
ACGGGCTGGC CCGCGACCGA CTGGGTCGAA GACATCATGC TGCGCACCCA ATCGCCCGAC
GTCTATGACG CCTGGGTCGC CAACGAGATC CCCTTTGACG CGCCCGAAGT GGTCAACGCC
ATCGAGACGT TCGGCGTCTT CGCCCGCAAC GGCGATTACG TGAATGGCGG TGTGGAGGCG
GTGTCGTCCA CCGACTTCCG CGAAAGCCCC CTGGGCCTCT TCACCTTCCC GGCGGAATGC
TACCTGCACC GTCAGGCGTC GTTCATCCCG ACATTCTTCC CCGAAGATGC GGATGTGGAC
TTCTTCTACT TCCCCGCGTT TGAAGGCGAA GATCTGGGTT CGCCCGTCTT GGGCGCCGGC
ACTCTGTTCG GCATCACCCA GGACAGCGAA GCGGCACAGG CATTCATGGC GTTCCTGCAA
ACGGAAATCA GCCACGAGGT CTGGATGGCG CAGTCAGGCT TCCTGACACC GCATACCGGC
GTGAATTCGG AGCTGTTCGC ATCCGACACG CTGCGCCAGA TGAACGACAT CCTGCTGGGG
GCCACGACGT TCCGCTTTGA TGCCTCTGAC CTGATGCCGT CTGAAATCGG ACAGGGTATC
TTCTGGTCCG GCATGGTCGA TTATGTGGGT GGCGAAGATG CCGCCTCCGT CGCGGCCCGG
ATCCAGGACC GTTGGGCTGA AATCCAGTAA
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| Protein sequence | MKKIYLASAA ALALSASGAL ADGHINHIFP VGEGEFNWDS YTAYADAFDL SGQELTMTGP
WTGDDAELVN AVLDYFESAT GATVQYSGSD SFETDIVVAT QAGSAPNIAV FPQPGLMTDL
ASRGFLTPLA PETADWVREN YAAGESWVSL GTAANAAGEE ALYGFFYKVD LKSLVWYSPE
AFDEAGYDIP ETMEDLLALN DQIVEDGATP WCIGLGSGGA TGWPATDWVE DIMLRTQSPD
VYDAWVANEI PFDAPEVVNA IETFGVFARN GDYVNGGVEA VSSTDFRESP LGLFTFPAEC
YLHRQASFIP TFFPEDADVD FFYFPAFEGE DLGSPVLGAG TLFGITQDSE AAQAFMAFLQ
TEISHEVWMA QSGFLTPHTG VNSELFASDT LRQMNDILLG ATTFRFDASD LMPSEIGQGI
FWSGMVDYVG GEDAASVAAR IQDRWAEIQ
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