Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1871 |
Symbol | |
ID | 3934322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1857993 |
End bp | 1858784 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637904225 |
Product | hypothetical protein |
Protein accession | YP_509813 |
Protein GI | 89054362 |
COG category | [S] Function unknown |
COG ID | [COG3503] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0219449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGGCAA AACCCACTAC ACCTGTATCC ATGACCCAGA CCCTCCCCGA TGACACCGCC CCCTACGCCC GCCCGGGCGC GCGTATCCCC GCGCTCGACA TCGCGCGCAC CGGCGCGCTT GCGGCCATGG TGCTGTTTCA CTTCGTCTTT GATCTGGAGA TGTTCGGCCA TGTGCCGCGC GGGACTGCCA CGACAGGCAT CTGGCGGGCG CTGGCCGTGG CGACGGCGGG ATCGTTCCTG TGTCTCGCGG GTATGGGCCT GTGGCTGGCC CATGGCACCG GTATCCGCTG GCCCGCGTTC TGGCGGCGGT TTGCCAAGGT GGCGGGGGCG GCGGGTCTGG TCAGCATCGG CACCTATATC GCTTTCCCCC ATGCCTTCGT CTTCTTCGGC ATCCTCCATT CCATCGCGCT TTGCAGCCTG TTGGGCCTTC TTGCGCTGCG GTTGCCCGTT CTGGCCATCG CGGGCCTCGC CGTGGTCGTC TTCTACGTGC CGGAGTTTGC CCGCTCGTCC GCATTCGACG CGCCCTATTG GTGGTGGACG GGCCTTCAGA CCCGACCTCT CAGCACGGTG GATTATGAAC CGATCTTTCC CTGGTTCGCG CCGTTTCTCG CCGGGGTGGC GGTGTCCAAA TTTGCCACAC AGATGGGCCT GTGGGCGCGC CTCTCAACGC CCGCCCCGTC CCGGGTCATA CATCTTGCGG GGCTGCCGGG CCGCCATTCG CTGCTGATCT ACCTGATCCA TCAACCGATC CTGATCGGCC TTGTCTGGGG CGTCACGCAA CTGATGCGCT GA
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Protein sequence | MPAKPTTPVS MTQTLPDDTA PYARPGARIP ALDIARTGAL AAMVLFHFVF DLEMFGHVPR GTATTGIWRA LAVATAGSFL CLAGMGLWLA HGTGIRWPAF WRRFAKVAGA AGLVSIGTYI AFPHAFVFFG ILHSIALCSL LGLLALRLPV LAIAGLAVVV FYVPEFARSS AFDAPYWWWT GLQTRPLSTV DYEPIFPWFA PFLAGVAVSK FATQMGLWAR LSTPAPSRVI HLAGLPGRHS LLIYLIHQPI LIGLVWGVTQ LMR
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