| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1841 |
|---|
| Symbol | |
|---|
| ID | 3934292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1826195 |
|---|
| End bp | 1827487 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637904195 |
|---|
| Product | citrate synthase |
|---|
| Protein accession | YP_509783 |
|---|
| Protein GI | 89054332 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.040491 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACA CCAGAACCGC CACTTTGACC GTTGACGGAC AGACCGTCGA TCTGCCCATT
CATTCGCCCA CCGCAGGCCC CGACGTCGTC GACATCGGCA AGCTCTATGG GCAGGCCGGT
GTGTTCACCC ATGACCCGGG CTTCACCTCC ACCTCGGCGT GCGAATCGTC GATCACGTTC
ATTGATGGTG ACAAGGGCGA GTTGCTGCAT CGCGGCTACC CCATCGACCA ACTGGCAAGC
CAGTCCAACT ACATCGAAGT CTGCTTCCTG CTGCTTTATG GCTATCTGCC CTCGCGCGCG
GAATACGACA AGTTCGAGAC GACCATTACC CACCACACCA TGCTGCACGA GCAGATGGCT
AACTTCTTCC GGGGTTTCCG CCGGGACGCC CATCCCATGG CGGTCATGGT CGGCGTCGTG
GGCGCAATGT CTGCGTTCTA TCACGACAGC ACCGATATCC ATGATGAGCA TCAGCGCGAG
GTCGCCTCGC ACCGCCTGAT CGCCAAGATG CCGACGATTG CGGCCTGGGC CTATAAATAC
ACCATCGGCC AGCCCTTCGT GTATCCGCGC AATGACATGA GCTACGCGGC CAACTTCCTG
CGCATGTGCT TTGCGGTTCC GGCGGAGGAA TACGTGGTCG ACCCGATCCT TGAGAAGGCG
ATGGACCGCA TCTTCACGCT CCATGCGGAT CACGAACAAA ACGCGTCCAC GTCGACCGTG
CGTTTGGCCT CATCCTCCGG CGCCAATCCC TTCGCCTGCA TCGCCGCCGG GATTGCCTGC
CTCTGGGGTC CGGCCCATGG CGGCGCGAAC CAGGCCTGTC TGGAGATGCT GAAGGAAATC
GGCACGGTTG ACCGCATTCC AGAGTTTATC GCGCGGGCCA AGGACAAGAA CGACAGCTAC
CGCCTGATGG GCTTTGGCCA CCGGGTCTAC AAGAACTTCG ATCCCCGTGC GACGGTGATG
AAACAATCCG CCGACGAAGT GCTGGAGTTG CTTGGGGTTG AGGACAATCC GCTTCTGCAG
GTCGCGATGG AGCTGGAAAA ACAGGCGCTG GCTGATCCCT ACTTCTCCGA GAAGAAGCTG
TTCCCCAACG TCGATTTCTA CTCCGGCATT ATTCTAGAGG CGATGGGCTT TCCGACGTCA
ATGTTCACAC CCATCTTCGC GCTGTCGCGC ACCGTGGGCT GGATTTCCCA ATGGAAAGAA
CAGCTTGGCG ACCCAGCCCT GAAAATTGGC CGCCCCCGCC AGCTTTATAC TGGCGAGACG
GCGCGCGATT ACGTGGACAT CAAAGACCGC TGA
|
|---|
| Protein sequence | MADTRTATLT VDGQTVDLPI HSPTAGPDVV DIGKLYGQAG VFTHDPGFTS TSACESSITF
IDGDKGELLH RGYPIDQLAS QSNYIEVCFL LLYGYLPSRA EYDKFETTIT HHTMLHEQMA
NFFRGFRRDA HPMAVMVGVV GAMSAFYHDS TDIHDEHQRE VASHRLIAKM PTIAAWAYKY
TIGQPFVYPR NDMSYAANFL RMCFAVPAEE YVVDPILEKA MDRIFTLHAD HEQNASTSTV
RLASSSGANP FACIAAGIAC LWGPAHGGAN QACLEMLKEI GTVDRIPEFI ARAKDKNDSY
RLMGFGHRVY KNFDPRATVM KQSADEVLEL LGVEDNPLLQ VAMELEKQAL ADPYFSEKKL
FPNVDFYSGI ILEAMGFPTS MFTPIFALSR TVGWISQWKE QLGDPALKIG RPRQLYTGET
ARDYVDIKDR
|
|---|
| |