Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1820 |
Symbol | |
ID | 3934269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1809180 |
End bp | 1811027 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637904172 |
Product | ABC transporter related |
Protein accession | YP_509762 |
Protein GI | 89054311 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.273612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.489617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGCA TGTCTGATAT CGGGTACTCT GTCGCCGGTC GCTCTCTGCT GGAGGGCGCC TCTGTCACCA TTCCTGCGGG CCACAAGGTG GGCATCGTGG GCCGGAACGG GACGGGCAAG ACTACGCTTT TCCGCATCAT TCGGGGTGAA TTGGGTCTGG ATACCGGCGA AATCACCCTG CCCGCGGGCA CAAAGATCGG CGGCGTAGCG CAAGAAGTGC CCTCGTCCGA GACATCCCTG ATCGACACAG TTCTGGAGGC CGACACGGAG CGCGCCGAGC TTCTGGCCGA CACATCCGAG GACCCGACCC GCATCGCAGA TGTCCAGGCC CGTCTGGCCG ACATCGACGC CTGGGGGGCC GAAGCGCGCG CCGCCACGAT CCTGCGCGGC CTTGGGTTTA GCCACGCCGA CCAGCAACGC CCCTGCTCCG CCTATTCCGG CGGCTGGCGG ATGCGTGTAG CGCTGGCCGG TGTCCTGTTT TCGCAACCCG ATATCCTGCT GCTCGACGAG CCGACCAACT ATCTGGATCT GGAAGGTGCG CTGTGGCTGG AGGCTTATCT GGCCAAATAC CCCCACACGG TCCTGATCAT CTCCCACGAC CGCGGCCTGC TGAACCGCGC TGTCGGTCAC ATCCTGCACC TCGCCGACAA GACGCTGACC TACTATACGG GCGGCTATGA CACCTTCGCC AAGACCCGGG CCGAGCGACG CGCTGTGCAG GCTGCGGCGG CAAAGAAGCA AGACCTGCAA CGGGCGCATC TGCAAAGTTT CGTGGACCGC TTCAAGGCCA AGGCCTCCAA GGCGAAACAG GCGCAATCAC GCGTGAAGAT GCTGGAACGG ATGGAGACGA TCCGCGCGCC CGAAGATGCC GCGCGCACCG TCTTCACCTT TCCGGAGCCC GAGGAGCTTA GCCCGCCCAT TGTCGCCATG GACAACGCCG CCGTGGGCTA CACCGAAACG CCGGTCCTCA AGCGCCTGAA CCTGCGCCTG GATCAGGACG ACCGCATCGC GCTTCTGGGC CGCAACGGCC AAGGGAAGTC GACGCTATCG AAACTGCTCG CGGGCAAGCT GCAAACAATG GAGGGACGCA TCACGTCCTC TTCCAAACTG CGCATCGGCT ACTTCGCGCA GCATCAGGTG GATGAGCTGC ATCTGGACGA GACGCCACTG GATCACCTGC GCCGTGAACG GCCCGAAGAC GCCCCGCCGA AACTGCGCGC ACGCCTCGCG GGTTTCGGTC TGGGCGCGGA TCAGGCCGAA ACAATCGTCG CCAAGCTGTC GGGTGGCCAA AAGGCGCGGC TCAGCCTGCT GCTCGCGACG CTAGAGGCCC CGCACCTTTT GATCCTCGAC GAGCCGACCA ACCACCTCGA TATCGAATCC CGCGAAGCGC TGGTCGAAGC CCTCACCGCC TACACCGGGG CGGTTATCCT CGTCTCCCAC GACATGCATC TCCTGTCCCT GGTCGCCGAC CGCCTCTGGC TGGTTCAGGA CGGCCATGTC GCGCCCTATG CCAATGACTT GGAGACCTAC CGCAAGAGCC TTCTGGGCAC TGAGCCCAAA TCCCAAAAGC AGGACAAACC GAAAGCAAAA CCCAAGCAAC TCTCCCACGA TCAGATCAAG GAGCTGCGCG CGGAGCTTAA AAAAGCTGAA GCCCGCGTGG AGAAGATAGA AGACATGCGC GAAAAGCTTG CCAAGAAGCT CGCTGACCCC GCGCTCTATG AAGATACCCG CGTGGGCGAG CTAACCACTT GGCAAAAGAA ATACGCCGAA GTCATGGATG GGCTCGCCCG CGCCGAAACG CTGTGGGAGA AGGCCGCCGA TGCATTGGAC CGTGCGCAGC CGCGCTAA
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Protein sequence | MLRMSDIGYS VAGRSLLEGA SVTIPAGHKV GIVGRNGTGK TTLFRIIRGE LGLDTGEITL PAGTKIGGVA QEVPSSETSL IDTVLEADTE RAELLADTSE DPTRIADVQA RLADIDAWGA EARAATILRG LGFSHADQQR PCSAYSGGWR MRVALAGVLF SQPDILLLDE PTNYLDLEGA LWLEAYLAKY PHTVLIISHD RGLLNRAVGH ILHLADKTLT YYTGGYDTFA KTRAERRAVQ AAAAKKQDLQ RAHLQSFVDR FKAKASKAKQ AQSRVKMLER METIRAPEDA ARTVFTFPEP EELSPPIVAM DNAAVGYTET PVLKRLNLRL DQDDRIALLG RNGQGKSTLS KLLAGKLQTM EGRITSSSKL RIGYFAQHQV DELHLDETPL DHLRRERPED APPKLRARLA GFGLGADQAE TIVAKLSGGQ KARLSLLLAT LEAPHLLILD EPTNHLDIES REALVEALTA YTGAVILVSH DMHLLSLVAD RLWLVQDGHV APYANDLETY RKSLLGTEPK SQKQDKPKAK PKQLSHDQIK ELRAELKKAE ARVEKIEDMR EKLAKKLADP ALYEDTRVGE LTTWQKKYAE VMDGLARAET LWEKAADALD RAQPR
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