| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1806 |
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| Symbol | prfA |
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| ID | 3934255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1794617 |
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| End bp | 1795681 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904158 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_509748 |
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| Protein GI | 89054297 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0496443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.210435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAA CACTGCCCCG CGACCGCCTG CGACAGATCA CGGATCGGTT CGAATATCTG
GAAGCGCAGC TCAACGGCGG GCCGGACCCT TCAGACATCG CCAAGATCAG CCGGGAATAT
GCGGAGCTGA AGCCGGTCGT CGCCGAGATT GCGGGGTACG AGCAACTGCT GGCGGATATG
GCCGAGGCGC AGAACATGCT GGCCGATCCT GACATGAGGC CCCTGGCGGA GGAGGAATTG
CCCCGCCTGG AAGCCGCCAT CCCCGCCGCC GAGCAATCGC TGCAACTGGC GCTTCTGCCC
AAGGATGCCG CCGACGCGAA GCCTGCAATG ATCGAGATCC GCCCTGGCAC CGGCGGCGAT
GAGGCGGCTT TGTTCGCGGG TGATCTGTTG CGGATGTATA CGCGCTATGC GGAGGCGCGC
GGCTGGCGGT TGGAGATCGT GGATCTGCAG GAGAGTGATC TGGGCGGCAT CAAGGAATGC
ACTGCGCGGG TGGAGGGGGA GAATGTCTTT GCCCGGCTGA AGTTTGAGAG TGGCGTCCAC
CGGGTCCAGC GCGTGCCGGA AACGGAATCG GGCGGGCGTA TCCATACCTC TGCCGCCACC
GTCGCTGTGT TGCCGGAGGC CGAGGACGTC GACATTGACA TCCCCGCCAC CGATATTCGC
ATCGACACAA TGCGCGCCAG CGGGGCGGGC GGGCAGCACG TGAACACCAC GGATTCAGCG
GTGCGCATCA CCCATGTGCC CTCTGGCATC GTGGTCGTCA GTTCCGAGAA GTCCCAGCAC
CGCAACCGGG AAATCGCGAT GCAGACGCTG CGCACCCGGC TCTATGATCT GGAACGGCAG
AAGGCGGATG ATGCCATGGC CGCGGACCGC AAGGCGCAGA TCGGCTCGGG CGATCGCTCG
GAGCGGATCC GCACCTATAA TTTCCCGCAA GGGCGCATGA CCGATCACCG CATTAACCTG
ACACTCTATA AGCTGGATGC GGTGATGCTG GGGGATCTGG ACGAAATCGT CGACGCCCTG
ACGGCAGAGG ATCAGGCCAT GAAACTGGCC GAGATGACCG GGTGA
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| Protein sequence | MAATLPRDRL RQITDRFEYL EAQLNGGPDP SDIAKISREY AELKPVVAEI AGYEQLLADM
AEAQNMLADP DMRPLAEEEL PRLEAAIPAA EQSLQLALLP KDAADAKPAM IEIRPGTGGD
EAALFAGDLL RMYTRYAEAR GWRLEIVDLQ ESDLGGIKEC TARVEGENVF ARLKFESGVH
RVQRVPETES GGRIHTSAAT VAVLPEAEDV DIDIPATDIR IDTMRASGAG GQHVNTTDSA
VRITHVPSGI VVVSSEKSQH RNREIAMQTL RTRLYDLERQ KADDAMAADR KAQIGSGDRS
ERIRTYNFPQ GRMTDHRINL TLYKLDAVML GDLDEIVDAL TAEDQAMKLA EMTG
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