Gene Jann_1804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1804 
Symbol 
ID3934253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1793050 
End bp1793985 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content63% 
IMG OID637904156 
Productinosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_509746 
Protein GI89054295 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.327684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA AGATTATCAT CGACACGGAT CCGGGCCAGG ATGACGCAGT CGCAATTCTG 
CTGGCCCTCG CCTCACCGGA ATTGGAGGTG ATGGGGGTGA CGGCTGTGGC GGGCAATGTG
CCCCTGGAGC TAACCGCCAA AAACGCGCGG ATCGTATGCG AGCTGGCGGG TCGCGCGGAC
GTGCCGGTGT TCGCAGGCTG CGACAGACCA TTGCGCCACG ATCTGGTGAC GGCAGAGCAT
GTGCACGGCA AGACCGGGTT GGACGGGCCT GAACTGCCAG AGCCGACGAT GCCGTTGCAA
GACGCGCACG GCGTCGATTT CATTGTCGAC ACCTTGCGCC GTGAGCCCGC GGGCACGGTA
ACCCTCTGCC CCCTCGGCCC ACTCACCAAT ATCGCGACCG CCTTTGACCG CGCACCGGAC
ATTGTTGAGA AAGTCCAACA GATTGTCCTG ATGGGGGGCG CGTATTTCGA GGTGGGCAAC
ATCACACCTG CCGCCGAATT CAACATCTAC GTGGACCCGG AGGCGGCGGA CATCGTCTTC
AAATCCGGCT GTGACATCGT GGTTATGGGC CTTGACGTGA CCCACAAGGC GCTAACCACC
GCGCCGCGTG TGCAGGCGTT CCGCGATATG GGCACGCGTC CCGGCACGAT GGTTGCGGAA
TGGACGGATT TCTTCGAGAG GTTCGATAAG GAGAAGTACG GCAGTGCGGG CGCGCCGCTC
CATGACCCGT GCGTCATCGC CTATCTGATC GCGCCGGAGC TGTTTTCCGG CCGGGTCATC
AATGTGGAGA TCGAGACCCG GTCCGACCTG ACACGCGGCA TGACCGTGGC CGATTGGTGG
GGGGTGACGG ACCGCGAAAA GAACGCGATG TTCATCGGCG ACCTGGACGC GGACGGCTTC
TTCGCGCTGT TGGTTGACCG GATCGGGCGG CTATGA
 
Protein sequence
MARKIIIDTD PGQDDAVAIL LALASPELEV MGVTAVAGNV PLELTAKNAR IVCELAGRAD 
VPVFAGCDRP LRHDLVTAEH VHGKTGLDGP ELPEPTMPLQ DAHGVDFIVD TLRREPAGTV
TLCPLGPLTN IATAFDRAPD IVEKVQQIVL MGGAYFEVGN ITPAAEFNIY VDPEAADIVF
KSGCDIVVMG LDVTHKALTT APRVQAFRDM GTRPGTMVAE WTDFFERFDK EKYGSAGAPL
HDPCVIAYLI APELFSGRVI NVEIETRSDL TRGMTVADWW GVTDREKNAM FIGDLDADGF
FALLVDRIGR L