Gene Jann_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1789 
Symbol 
ID3934238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1775870 
End bp1776646 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content65% 
IMG OID637904141 
Productornithine-acyl[acyl carrier protein] N-acyltransferase 
Protein accessionYP_509731 
Protein GI89054280 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.327684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGCG CCCCGGCTTT GGGGGGGGCT CGGACGGCGC CGCAGTTTCG TCTGCTCAAG 
GGTCAATACG CGGTGCGGAT CGCGAGCACA CCGGCCGATC TGGACGCAGC GCAGCGCCTG
CGGGCCTTGG CGTTTCGGAC AGCCATCGGC ATCGACGCCG ACCCTTTCGA TGCGGAATGC
GCCCATATTC TGATTGAAGA TCAGCGGGAT GGCGCCTTGG TGTGCTGTTT TCGGGTGCTG
CATCTGGCAA GCGGCGCTGA CTTCGCCGAG AGCTACTCTG CCCAGTTCTA TGACCTGACC
GCCTTGGAGC GGTTTGATGC TCCGATGGTC GAGATGGGGC GGTTTTGCAT CCACCCCGCG
CGTCGCAACG CCGATATCCT GCGCGTCGCC TGGGGGGCGA TGACGGCTTA TGTGGATCTT
CACGGCGTTG AGATGCTGTT TGGCTGCGCC TCGTTCAAAG GCACGCGGCC CGAAATATAC
CGCGATGCCT TTGCGGTCCT GCGGGACCGT CACCTTGCGC CCGCCCGCTG GCAGCCACGG
GTCAAGGCGG CATCGGTCCA TCGTTTTGCC GATGATCCCG GGTGCCGCGT TGATCTGAAG
GCCGCCCAGG CTTTGATGCC ACCGCTTCTG CGCACCTATC TTTTGATGGG CGGTTGGGTC
AGCGACCACG CCGTGATTGA CCGGGAGATG GACACGCTTC ACGTCTTTAC CGGGTTGGAG
ATCCGGGCCG TGCCGCCCGT CCGTGCGCGC CTTCTGCGCA ATGTGGCGGC GCCCTAG
 
Protein sequence
MAGAPALGGA RTAPQFRLLK GQYAVRIAST PADLDAAQRL RALAFRTAIG IDADPFDAEC 
AHILIEDQRD GALVCCFRVL HLASGADFAE SYSAQFYDLT ALERFDAPMV EMGRFCIHPA
RRNADILRVA WGAMTAYVDL HGVEMLFGCA SFKGTRPEIY RDAFAVLRDR HLAPARWQPR
VKAASVHRFA DDPGCRVDLK AAQALMPPLL RTYLLMGGWV SDHAVIDREM DTLHVFTGLE
IRAVPPVRAR LLRNVAAP