| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1733 |
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| Symbol | |
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| ID | 3934181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1726402 |
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| End bp | 1727148 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904084 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_509675 |
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| Protein GI | 89054224 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0214124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.405156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGGA AACTGGCGGC AGGCAATTGG AAGATGAACG GGGTAGAGGC CGATTTGGCC
GAGGTGGACG CTTTGGGCGA GGCTGTTGCG GCGGCCAATT GCGACGTCTT GCTGTGCCCG
CCCGCGACGC TGATTGCGCC GATGGCCAAG CGCGCGGGGT TGATGGACCT CTATGTCGGC
GGCCAGACAT GCCATACGGC CGCGTCGGGC GCGCACACTG GCGACGTGTC GGCGGCGATG
CTGGCCGACG CGGGCGCGAG CCACGTGATC CTTGGCCATT CGGAACGACG CGCAGACCAT
GGCGAGCGCA GCGAAGATGT GGCGGCCCAG GTCACGGCCG CCATTGACGC CAACCTGATC
GCGATCATCT GCGTCGGCGA AACCGAAGCC GAGCGTGATG CGAATGTGAC CCTGAACGTC
GTCTCCAGCC AGTTGGCAGG CTCCATCCCC ACCGGCGCCA CGCCCGCGCA GATCGTCGTG
GCCTATGAGC CCGTCTGGGC CATCGGCACG GGCCGCACGC CGACGCTGGA ACAGATTGCC
GAGGTCCATG ATCACATCCG GTCTGAACTG GCCGCGCGCC GGGGCAGCGC CGCCAATGAT
ATCCCGCTGC TCTATGGCGG ATCGGTCAAG CCCGGCAATG CCGCAGAGAT CTTTGCGGTG
TCCAATGTGG ACGGCGCGCT GGTCGGTGGC GCATCGTTGA AGGCGTCGGA TTTCGGCGGA
ATTATCGCCG CCCTGTCCGC CGCCTGA
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| Protein sequence | MARKLAAGNW KMNGVEADLA EVDALGEAVA AANCDVLLCP PATLIAPMAK RAGLMDLYVG
GQTCHTAASG AHTGDVSAAM LADAGASHVI LGHSERRADH GERSEDVAAQ VTAAIDANLI
AIICVGETEA ERDANVTLNV VSSQLAGSIP TGATPAQIVV AYEPVWAIGT GRTPTLEQIA
EVHDHIRSEL AARRGSAAND IPLLYGGSVK PGNAAEIFAV SNVDGALVGG ASLKASDFGG
IIAALSAA
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