| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1718 |
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| Symbol | |
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| ID | 3934166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1702126 |
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| End bp | 1703415 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904069 |
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| Product | major facilitator transporter |
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| Protein accession | YP_509660 |
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| Protein GI | 89054209 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.150429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACCG TTATCCGCAG CGCCTGGGCG CTTCTTCTGG GCATGTTCCT TTTGCAGATC
GGCAACGGTT TGCAGGGCTC TCTCATGGGC GTGCGGGGTG CCATTGAAGG CTTCACCACG
TTTGAGTTGT CGCTGATCGG ATCGGCCTAT TTTATTGGGT TTCTGGGGGG GTCGTCCCTT
GCGCCGAAGT TCATCGCGCG GGTGGGGCAC GTTCGCGTTT TCGCCGCTCT GGGCTCGTTC
ATCTCGGCCA TCGTGATCTC TTACCCCATC GTCACCGACC CCTATGCCTG GATGCTGTTG
CGGGTGGGCA TCGGTTTTTC CCTCTCCGGC GTCTATGTGA CCGCTGAGTC GTGGCTCAAC
AATTCGGCCA CGAACGAGAC GCGGGGCCAG TCGCTTTCGG CCTATATGCT GATGCAGATG
TTCGGCCTTG TGGCGGCGCA GGGCATTCTG GCGGTGGGCG ACCCGTCGGG CTGGATCCTG
TTTGTCATCC CGTCCATCCT GGTGTCGCTG TCCTTTGCGC CGATCCTTTT GTCGGCCACG
CCGACGCCTG CGATTGAGGA AACGCGGTCA ATGTCGCTGC GCCAACTCTA TGACGCGTCG
CCCTTCGCCT CGATCTCCAT GTTGTTGATG GGGAGCGTTT TTGCGGGCCA GTTCGCCATG
TCCGCGGTCT ACGCAACTGA GGCCGGGCTG ACCGTCCCGC AACTCTCGGC GTTTGTGTCC
GCGATCTTCG TGGGGGCCAT CGTGCTGCAA TACCCCATTG GCTGGTTTTC CGACCGGATG
GACCGCCGCA TTCTGATCGT AGGGGCCTCG GCGCTCGGGT CCGTGGTGGC CATCGTGGGC
ATGATTTTTG GGCACAGTTT CAGCGTGCTT CTGGTGGTCG CGGCGCTGTC GGGCGGGTTG
GCGCAACCGC TTTATGCGTT GATCATTGCC TATATCAACG ACTATCTGGA CCCCGCCGAT
ATGGCCGCCG CGTCGGGGGG GATGATCTTC GTGAACGGCA TCGGCGCGAT CTCTGGCCCG
CCGCTGATGG GCCTTCTGAT GGGCTATTTC GGGGCGGCTG GCTTCTGGCT GTTTCTGGCG
GTTATTCTGG CGATCATGGC CGCCTATGGG TTGTTCCGCA TGACCCAGAG CATATCTCCC
TACAAGGAAG AGGACGACTA CATGGCCGTC CCCTACGCCA ACCTCATGCC CGGCACCGCA
TCGCCTGTGG CGGTTGAGGC TGCGCAGGAG TATTATGCAG AAACCGCCGA AGAAATGGCG
AGCGAGACAG AGGATGAGCC CCGCCCATGA
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| Protein sequence | MITVIRSAWA LLLGMFLLQI GNGLQGSLMG VRGAIEGFTT FELSLIGSAY FIGFLGGSSL
APKFIARVGH VRVFAALGSF ISAIVISYPI VTDPYAWMLL RVGIGFSLSG VYVTAESWLN
NSATNETRGQ SLSAYMLMQM FGLVAAQGIL AVGDPSGWIL FVIPSILVSL SFAPILLSAT
PTPAIEETRS MSLRQLYDAS PFASISMLLM GSVFAGQFAM SAVYATEAGL TVPQLSAFVS
AIFVGAIVLQ YPIGWFSDRM DRRILIVGAS ALGSVVAIVG MIFGHSFSVL LVVAALSGGL
AQPLYALIIA YINDYLDPAD MAAASGGMIF VNGIGAISGP PLMGLLMGYF GAAGFWLFLA
VILAIMAAYG LFRMTQSISP YKEEDDYMAV PYANLMPGTA SPVAVEAAQE YYAETAEEMA
SETEDEPRP
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