| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1712 |
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| Symbol | |
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| ID | 3934160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1693359 |
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| End bp | 1694726 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637904063 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_509654 |
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| Protein GI | 89054203 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.136365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.743682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC CCGTCACCCA ATTCACCTGT TCCAACTGCG GCGCGGTCCA CAAGAAGTGG
TCCGGGCGCT GTGATGACTG CGGCGAGTGG AACACGATCC GCGAGGAAGC GCCTTTGGGG
TCCGGGCCCG GCAAGGCGGC GTTGGGCTCA GCCAAGGGCA AGCGGATGAT CCTGAAGGAT
CTGCGCACCA AGGAGACGCC CCCGCCGCGG CAATCGGCGG GCGTGGCGGA GCTGGACCGC
GTGTTGGGGG GCGGGTTGGT GCCGGCCTCC GCCACGCTGG TGGGCGGCGA TCCCGGCATC
GGCAAATCGA CGCTGCTGTT GCAGGCGGCG GCGGCGTTCG CGCGGCAGGG GTTGAAGGTG
ATTTATGTCT CCGGCGAGGA GGCCACGGCA CAGGTGCGGA TGCGGGCGGA GCGGTTGGGC
TTGTCCGAGT CTGCGGTCAT GCTGGCCGCA GAGACCAACC TGCGCGACAT CCTGACGACG
CTGGAGGCGG AAGCGCCGGA TCTGGCGATC ATCGATTCGA TCCAGACGAT GTGGCTGGAT
ACGGTGGATT CTGCGCCGGG GAGCGTCAGC CAGGTCCGCG CGTCGTCCCA CGAGTTGACG
ACCTTCGCCA AACGGCGCGG CACGAGCGTG ATGCTGGTGG GGCACGTGAC GAAGGAGGGG
CAGATCGCGG GGCCACGCGT GGTGGAGCAT ATGGTCGATA CGGTGCTCTA TTTCGAGGGC
GAGCGCGGGC ATCAGTTCCG CATCCTGCGC AGCGTGAAAA ACCGCTTTGG TCCGGCGGAC
GAGATTGGCG TGTTCGAGAT GACGGGGCGG GGGTTGGCGG AGGTGTCAAA CCCGTCGGCG
CTGTTTTTAT CCGACCGCGA GCAGCCCGCG CCGGGATCGG TGGTGTTTGC GGGCATCGAG
GGCACGCGGC CCGTGCTGGT GGAGTTTCAG GCGCTGGTCG CCCCGTCGAA CCTGAGCCAG
CCGCGCCGCG CCGTGGTGGG CTGGGACGGA TCGCGTCTGT CGATGATATT GGCGGTGCTG
GAGGCGCGCG CGGGCATCAC GTTTCAGGGC CTCGACGTCT ATCTGAACAT CGCGGGCGGC
ATGCGGATTA GTGAACCCGC CGCCGATCTG GCCGTGGCCA CAGCACTCCT GAGCGCGCGG
GAAGACGCCG CAATCCCGCG CGAAACGGTG GTTTTTGGGG AATTGTCGCT GTCGGGCGCG
TTACGTCCCG TCTCTCAGGC AGAAAACCGG TTGAAAGAGG CGGTGAAACT TGGTTTTTCC
ACTGCAATCG CGCCTTCGGG CTGTCGGATC GCCGATGATG CGGGCGTCAC AGTGAAAAGC
TTTAAGGATC TCCCTACTTT CGTGGGCGAC ATCTTTGGGG CAGGTTGA
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| Protein sequence | MAKPVTQFTC SNCGAVHKKW SGRCDDCGEW NTIREEAPLG SGPGKAALGS AKGKRMILKD
LRTKETPPPR QSAGVAELDR VLGGGLVPAS ATLVGGDPGI GKSTLLLQAA AAFARQGLKV
IYVSGEEATA QVRMRAERLG LSESAVMLAA ETNLRDILTT LEAEAPDLAI IDSIQTMWLD
TVDSAPGSVS QVRASSHELT TFAKRRGTSV MLVGHVTKEG QIAGPRVVEH MVDTVLYFEG
ERGHQFRILR SVKNRFGPAD EIGVFEMTGR GLAEVSNPSA LFLSDREQPA PGSVVFAGIE
GTRPVLVEFQ ALVAPSNLSQ PRRAVVGWDG SRLSMILAVL EARAGITFQG LDVYLNIAGG
MRISEPAADL AVATALLSAR EDAAIPRETV VFGELSLSGA LRPVSQAENR LKEAVKLGFS
TAIAPSGCRI ADDAGVTVKS FKDLPTFVGD IFGAG
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