| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1669 |
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| Symbol | |
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| ID | 3934117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1653195 |
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| End bp | 1653917 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637904020 |
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| Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
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| Protein accession | YP_509611 |
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| Protein GI | 89054160 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.544383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGGG GCTTGCCCGT CCGCGCCCGG CACGCCAAAA GGGACGCCAT GGCCAAGCAA
CTGACCTACC ACACGATACA CGAGATTTTC ACCCGCTTTC GCGACGCCGA AGCGGAGCCC
AAGGGCGAGC TGCATCACGT CAATGTCTAT ACCCTCGTGG TGGCCGTGGC GCTGTCGGCG
CAGGCGACGG ATGCGGGCGT GAACAAGGCG ACGAAGCGGT TGTTTGAGAT CGCCGATACA
CCGCAAAAGA TGCTCGACCT GGGGTTGGAG GCGGTGACGG AGCATATCAG GACCATCGGC
CTCTACCGCA ATAAAGCCAA GAACGTCATC AAGTTAAGCC AGATTCTGGT GGATGAATAC
GGCGGTGAAG TGCCGTCCTC CCGCACCGCC CTGCAATCGC TGCCGGGTGT GGGGCGCAAG
ACCGCAAATG TGGTGTTAAA CATGTGGTGG GGGATGCCGG CACAAGCCGT CGACACGCAT
ATTTTCCGGG TCGGCAACCG CACGCTGATC GCGCCGGGCA AGGATGTGGA CGCTGTTGAG
CGCGCGGTGG AAGACAACAT CCCGGCCGAA TTTCAACTGC ATGCGCATCA CTGGCTGATC
CTCCATGGCC GCTACATCTG CGTGGCGCGG AAACCAAAAT GCGGCGCCTG TCTGATCCGT
GATCTATGCG TGTTCGAGGA CAAGACGCCC GATCCGCTGC CGAAAAAAGG AGCGCGCCCA
TGA
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| Protein sequence | MLRGLPVRAR HAKRDAMAKQ LTYHTIHEIF TRFRDAEAEP KGELHHVNVY TLVVAVALSA
QATDAGVNKA TKRLFEIADT PQKMLDLGLE AVTEHIRTIG LYRNKAKNVI KLSQILVDEY
GGEVPSSRTA LQSLPGVGRK TANVVLNMWW GMPAQAVDTH IFRVGNRTLI APGKDVDAVE
RAVEDNIPAE FQLHAHHWLI LHGRYICVAR KPKCGACLIR DLCVFEDKTP DPLPKKGARP
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