| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1652 |
|---|
| Symbol | |
|---|
| ID | 3934100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1637436 |
|---|
| End bp | 1637960 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637904003 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_509594 |
|---|
| Protein GI | 89054143 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0785232 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.738354 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATCATC GCCCCCGCAC CGCGGCGCGA CATATATGGT CATTTGCAAA GACCTCGCAA
AACGCCATAT ATATCAGACA GACCTTACAG AAAGCCCCGG GACCCATGAC ACCCGAAGCC
CTCGAACGCT CGCAATCCTG GCTTGGCCAG GCCGCCCTTC GCCCGACCCG TCAGCGCCTT
GCGCTTGCGT CGCTTCTGGT GGGCGACGGC CAAGATCGTC ACGTGACAGC GGAAGGTCTG
CATGAAGCGG TGCTTGATAC CGGCGACAGG GTATCTCTGG CCACGGTGTA CAACACGTTG
CGCGCGTTTT GCGATGCGGG GCTGATGCAG GAAGTCACCG TCGACGGCAA TCGCAGCTAC
TTTGACACCC GGGTCGATGA TCACCCGCAC TTCTATCTGG AAGGCTGCGG CACACTGACC
GATGCCCCCG CGGCGGAGTT GCAGATCAAA AGCCTGCCGG ATGTGCCTGA CGGGTATGAG
ATCGCCAAGG TGGACGTCGT GATCCGCCTG CGCGAGAAGA CTTGA
|
|---|
| Protein sequence | MHHRPRTAAR HIWSFAKTSQ NAIYIRQTLQ KAPGPMTPEA LERSQSWLGQ AALRPTRQRL
ALASLLVGDG QDRHVTAEGL HEAVLDTGDR VSLATVYNTL RAFCDAGLMQ EVTVDGNRSY
FDTRVDDHPH FYLEGCGTLT DAPAAELQIK SLPDVPDGYE IAKVDVVIRL REKT
|
|---|
| |