| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1650 |
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| Symbol | |
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| ID | 3934098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1635215 |
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| End bp | 1637035 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904001 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_509592 |
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| Protein GI | 89054141 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.741768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.931428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTCC GCAATATCGC GATCATCGCG CACGTTGACC ACGGCAAGAC GACCCTCGTG
GACGAGCTTC TCAAGCAATC CGGCGCCTTC CGGGAGAATC AGGCCGTCGC CGAACGCGCC
ATGGACAGCA ATGATCTGGA ACGCGAGCGC GGCATCACGA TTTTCGCCAA GCCCACCTCG
CTGGAATGGA AGGGCACGCG GATCAACATC GTTGACACAC CGGGCCACGC GGATTTCGGT
GGCGAGGTGG AGCGGATCCT GTCGATGGTG GATGGCGTCG TCCTGTTGGT GGACGCGGCG
GAAGGCCCGA TGCCCCAGAC CAAATTCGTC CTGTCCAAAG CCCTGGCTCT GGGTCTGCGC
CCCATCGTGG TGCTCAACAA GGTCGACAAG CAGGATGCAG AGCCTGATCG CGCGCTGGAT
GAAGTGTTCG ACCTCTTCTC CTCGCTCGAC GCCAATGAAG ACCAGCTGGA TTTCCCGCAC
ATGTACGCCT CGGGCCGCTC CGGTTGGGCG GATCATGAAT TGGACGGACC CCGCAAACAT
CTGGACGCGC TGTTCAACCT GATCGTGCGC CATGTGCCGA CACCGACCCA GATTTCACGC
CAGGACGATG ACTTCCGCAT GCTGGCCACG ACCCTTGGGG CCGACGCCTT CGTTGGTCGG
TTGCTGACGG GCCGGGTTGA ATCCGGCCGC CTGAAGGTTG GTCAGACCGT CCAGACCCTG
TCGCGGCTCG GCGAGAAGAT CGAACAATTC CGCGTCACCC GCATTCAGGC GTTCCGGGGC
CTCGCGCAGC AAGACATTGA CGAGGCGTTG GCCGGCGATA TCGTGTCCCT CGCCGGCATG
ACGAAATCCA CCGTGGCCGA CACGATCTGT GCCTTGGCGG TGGATGAACC GCTGCACGCG
CAACCCATTG ATCCGCCTAC AATTACCGTC ACCTTTGGCA TCAACGACAG CCCGCTGGCC
GGTCGCGATG GCAAGAAGGT GCAGTCCCGC GTCATCCGCG AGCGCCTGAT GAAAGAGGCG
GAATCAAACG TCGCCATCAA GATCAGCGAC ACGCCCGGCG GAGAGGCCTT TGAGGTCGCC
GGTCGCGGTG AATTGCAGAT GGGCGTGTTG ATTGAAAACA TGCGCCGGGA GGGGTTTGAA
CTCAGCATTT CCCGCCCGCA GGTCCTGTTC CGCGAGATCG ACGATGTGCG CCATGAGCCG
GTCGAAGAAG TCACAATCGA TGTGGATGAC GACTATTCCG GCGCGGTGAT CGAGAAGCTG
ACCGGGTCCC GCAAGGGTGA GTTGGTGGAA ATGAAACCGG CGGGCGCGGG CAAGACCCGC
ATCATCGCCC ATGTGCCCTC TCGCGGTCTG ATCGGCTATC ACGGCGAGTT TCTGACCGAC
ACGCGCGGCA CCGGCGTGCT GAACCGCGTG TTTCACGAAT GGGCTCCGTT CAAGGGCGCA
ATCCCGGGCC GCCGTCAGGG TGTCTTGATC TCCATGGAAA ACGGCACCTC CGTCGCGTTC
GCGCTGTGGA ACCTGGAGGA TCGCGGCAAG ATGTTCATCG GCGCGCAGGC CCCGGTCTAC
ACCGGCATGA TCATCGGCGA GCATTCCCGC GACAACGATC TGGAAGTGAA CCCGCTCAAG
GGCAAGAAGC TGACCAACGT GCGCGCATCC GGCACCGACG AGGCGGTGAA GCTGACCACG
CCCGTCACCA TGTCGCTGGA ACAGGCGATT GCCTATATCG ACGATGACGA GTTGGTGGAA
GTCACGCCCA ACGCCATCCG ACTGCGCAAG CGCCACCTCG ATCCGCACGA GCGCAAGCGC
GCCTCCCGCG CGGGGGCCTG A
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| Protein sequence | MDLRNIAIIA HVDHGKTTLV DELLKQSGAF RENQAVAERA MDSNDLERER GITIFAKPTS
LEWKGTRINI VDTPGHADFG GEVERILSMV DGVVLLVDAA EGPMPQTKFV LSKALALGLR
PIVVLNKVDK QDAEPDRALD EVFDLFSSLD ANEDQLDFPH MYASGRSGWA DHELDGPRKH
LDALFNLIVR HVPTPTQISR QDDDFRMLAT TLGADAFVGR LLTGRVESGR LKVGQTVQTL
SRLGEKIEQF RVTRIQAFRG LAQQDIDEAL AGDIVSLAGM TKSTVADTIC ALAVDEPLHA
QPIDPPTITV TFGINDSPLA GRDGKKVQSR VIRERLMKEA ESNVAIKISD TPGGEAFEVA
GRGELQMGVL IENMRREGFE LSISRPQVLF REIDDVRHEP VEEVTIDVDD DYSGAVIEKL
TGSRKGELVE MKPAGAGKTR IIAHVPSRGL IGYHGEFLTD TRGTGVLNRV FHEWAPFKGA
IPGRRQGVLI SMENGTSVAF ALWNLEDRGK MFIGAQAPVY TGMIIGEHSR DNDLEVNPLK
GKKLTNVRAS GTDEAVKLTT PVTMSLEQAI AYIDDDELVE VTPNAIRLRK RHLDPHERKR
ASRAGA
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