| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1585 |
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| Symbol | |
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| ID | 3934033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1566395 |
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| End bp | 1567315 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903936 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_509527 |
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| Protein GI | 89054076 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.173107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATC TCACGATCAA ACAATTGCGC TACGTCGATG CCTTGGCCCG CCACGGGCAT
TTCGGCCATG CGGCGGCGGC GTGCAATGTG ACGCAACCGG CCTTGTCGAT GCAGATCAAG
GAGATGGAGG AGGCGTTCGG CCTGCCGCTG TTTGAGCGCA CGCCCCGGCA AGTGCGCCTG
ACCGGGTTCG GCGAGACTGT GCTGACCCGC GCCAAAGACA TCCTACGCGC GGTTGATGAG
TTGGACGATC TGGCCCGCGC TGCCCGTGGC GGGCTGACGG GGCGGCTGCG GTTGGGCGTG
ATCCCGACCA TCGCGCCCTA CCTGTTGCCG CGCCTCATCG GCACTCTGGG GCTGCATTAC
CCGCAGATCG ACCTGCATAT TCGGGAAACT TTGACGCCGC GCCTGTTGGA GGATTTGTCC
GCCGGGCGGC TGGACACCGC GATCCTGGCC CTTCCCGTGT CCGTGCCCGC GTTGACCGAG
GTGCCGCTCC ATGATGAGGA ATTCGTCCTG GTGCGGCCCG CCGAGGATGA CGACAAGCCC
GTTCCCGATG GCGAGGCGCT GGCCCAGATG CGCTTGCTTC TGCTGGAGGA AGGGCATTGC
TTCCGCGACC AAGCGCTGAG TTTTTGCAAC ATTCGCAGCA GCTTACCGAG AGAGGGGCTC
GACGGCTCCA GCCTGTCGAC ATTGGTGCAA ATGGTCGGCG CAGGCATTGG CGTGACGCTG
ATCCCCGATA TGGCGGTGGG GGTAGAGACG CGGTCCGCCA CCGTCTCCGT GGCGCGATTT
GCGCAGGCGA CCCCCAAACG GACCATCGGC ATGGTCTGGC GCAAAGCCAG CCCTTTGGCG
ACTGAGCTGG AAGGCATGGC GGAGGTCGTC CGCACAGCCA TAATGCCGGA GGGCCTCTGC
GTGGGCCCGA CGCCCGGGTA A
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| Protein sequence | MNNLTIKQLR YVDALARHGH FGHAAAACNV TQPALSMQIK EMEEAFGLPL FERTPRQVRL
TGFGETVLTR AKDILRAVDE LDDLARAARG GLTGRLRLGV IPTIAPYLLP RLIGTLGLHY
PQIDLHIRET LTPRLLEDLS AGRLDTAILA LPVSVPALTE VPLHDEEFVL VRPAEDDDKP
VPDGEALAQM RLLLLEEGHC FRDQALSFCN IRSSLPREGL DGSSLSTLVQ MVGAGIGVTL
IPDMAVGVET RSATVSVARF AQATPKRTIG MVWRKASPLA TELEGMAEVV RTAIMPEGLC
VGPTPG
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