Gene Jann_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1583 
Symbol 
ID3934031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1564192 
End bp1565589 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content65% 
IMG OID637903934 
ProductPUCC protein 
Protein accessionYP_509525 
Protein GI89054074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.652092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGTA TCAAAGACAC TCTGCTCAGG CGCATCGCGG TGGTTACGCC GCGCTATCTG 
CCGTTTGCCG ATGTCGCCAG TGACGCAGTC CCCCTGTCCC GTCTTCTTCG TCTGTCTCTG
TTTCAGGTCT CAGTTGGGAT GGCCCTTGTT TTGCTGGTCG GCACGCTCAA TCGCGTGATG
ATCGTGGAGC AGGGCGTGCC GGCCTCACTG GTGGCGATCA TGCTGGCGCT GCCGCTGGTA
TTCGCGCCCT TCCGCGCCCT GATCGGCTTC AAGTCGGATC AGCACCGATC CGCTTTGGGA
TGGCGGCGGG TGCCGTTCAT CTGGAAGGGC ACGATGCTGC AATTCGGTGG GTTTGCGATC
ATGCCCTTCG CCCTGCTTGT CCTGTCCGGT TTTGGCGAGG CCGCCGATGC ACCGGTCTGG
ATTGGCCACA CATTTACCGC TTTGGCGTTC CTGCTGGTGG GCGCGGGCGT TCATACGGTG
CAGACCGTGG GCCTGGCGCT CGCTACTGAC CTGGTGCCGG AGGAGGATCA GCCCAAAGTC
GTGGGCCTGA TGTATGTGAT GTTGCTGGTC GGTATGATCG TCAGCGCCCT GGCATTCGGT
TGGCTGCTGG CCGATTACTC TCCCGGCAGG CTGGCGCAGG TGGTGCAGGG GGCCGCCGTT
GTCACCGTGG CGCTCAACCT GACCGCATTA TGGAAACAGG AGCCGCGCGA TCGTGCGCGC
GCCGCGGCCC CTCCGCCGAC GGAGAGTTTC CTGGCCGCGT GGTCCGTCTT TTCGGCGCGC
CAGGGCACGA AGCGCCTGCT GATCGTCATT GCGCTGGGGA CTATGGCCTA TGGCATGGCC
GAGGTGCTGC TGGAACCTTA CGGCGGCCAA GTCCTTGATA TGTCTGTCGC AATGACCACA
CGTCTGACGG CCGTGCTGGC GGCGGGCAGC CTTCTGGGCT TCTGGTTTGC CAGTTATGTG
CTGCTGCGCG GGGCCGAGCC CCTGAACGTT GCGACCTATG GCGCGGCCAT CGGCGTGCCG
GGGTTTCTCG CCATCACCGC CGCCGCGCAT CTGGGGGGTA TTGCGCTCTT TACAATCGGC
GTTTTCGCCG CCGGGGTTGG TGCGGGGCTC TTTGGTCACG GGACGCTGAC GGCCACCATG
CGCCGCGCGC CGCGTGAAAA GATCGGCCTG GCCCTTGGGG CCTGGGGGGC CGTTCAGGCG
ACCGCGGCGG GCATTGCGAT TGCGGCGGGT GGGATCATTC GCGATCTGAT TCTGGCCCTG
CCCGGCGGGC CGGACCTGCG CCCCGCCACG CCCTACATCC CGGTTTTTGT GCTGGAAGTG
GCGTTCCTGT TGGCGGCTCT TTGCGTAATT TGGCGTCTTC ACGCCATGGG CACTCGAAAT
TTGGAGCACA AGCTCTAG
 
Protein sequence
MSGIKDTLLR RIAVVTPRYL PFADVASDAV PLSRLLRLSL FQVSVGMALV LLVGTLNRVM 
IVEQGVPASL VAIMLALPLV FAPFRALIGF KSDQHRSALG WRRVPFIWKG TMLQFGGFAI
MPFALLVLSG FGEAADAPVW IGHTFTALAF LLVGAGVHTV QTVGLALATD LVPEEDQPKV
VGLMYVMLLV GMIVSALAFG WLLADYSPGR LAQVVQGAAV VTVALNLTAL WKQEPRDRAR
AAAPPPTESF LAAWSVFSAR QGTKRLLIVI ALGTMAYGMA EVLLEPYGGQ VLDMSVAMTT
RLTAVLAAGS LLGFWFASYV LLRGAEPLNV ATYGAAIGVP GFLAITAAAH LGGIALFTIG
VFAAGVGAGL FGHGTLTATM RRAPREKIGL ALGAWGAVQA TAAGIAIAAG GIIRDLILAL
PGGPDLRPAT PYIPVFVLEV AFLLAALCVI WRLHAMGTRN LEHKL