| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1571 |
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| Symbol | |
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| ID | 3934019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1548013 |
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| End bp | 1550439 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903922 |
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| Product | virulence factor MCE-like protein-related protein |
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| Protein accession | YP_509513 |
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| Protein GI | 89054062 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.645853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAC GTGATCTGCC AGAACCTGAA ATCACCGCGC GTCGGGGCAT AACCCTGTCC
TGGGTGTGGT TGATGCCGGT GTTTGCGCTG GCGATTTCTG CGTTTGTCGT GTTGCAGGCC
TGGCGCGGTC AGGGGCCGAT TATCGTGGTC ACGCTGCCGT CGGCGTCCGG CGTCGAGGCT
GGAGAGACAC CGCTGCGGTT TCGCGACGTG CAGGTCGGCG AGGTGGAGGA GCTTGAGTTT
TCCGACGGCT TCGGCGCGGT GGAGGCGCAT ATCCGCATCG ACAGTGACGT GGCCCCCTAC
GTGGACGCGG ATGCAGAATT TTGGCTGGTC GAGCCCGAGG TGACGGCCCG CGGTGTCACG
GGCCTCTCGA CCGTCCTGTC CGGCGTCTAT TTCGAGGGCA CATGGGATGG CGATATCGGC
GAGCCGCAAG ATCGCTTCGC AATCCGCGAC GACACGCCTC TGTCCCTGCC CGGCGAACGG
GGCACCCGGA TTGTCTTGCG CTCGCGCGAT GGGGGGCAAT TGGCTGCCGG CGCGCCGGTG
CTCTACAACG GGATCGAAGT GGGCCGTCTT GGGGTGCCGA TCCTGTCGGA GAACGGCACA
ATCGTCACGA TGGACGCCTT CATTGAAGCC CCCCACGATG CCCGCTTGTC CACAAACACG
CGGTTCTGGG ACATCTCCGG CATTTCAGTT GATTTGAATG CGTCGGGCCT GTCGGTCAAT
TTCGATAGCC TCGCGTCGCT TCTGGAAGGC GGGGTCACGT TTCAATCCCT CGTGACAGGC
GGCGAGCCGG TGGAGGAGGG GCAGTTGTTC GACGTCTTCA CCAGTCGGGA AGAGGCGCAG
CGCAGCGTTT TTGTGGCTGC GGTGGAACAG GTTCTGCCGC TGTCGGTGGT GATGCCGACG
GACGATCTGC GCCTCGGGTT GGGCGCGCTT GTGCGCTACC GGGGCATCCG GGTGGGCGAG
GTTACGAACA TCATCGGCTT CACGGACCCC CGCGCGCCGG AAGATGGTGT CCAGATCCTG
GTGACGTTCA GCATTGCGCC CGCGCGTATC GGCCTGACAG GCGATGGCGC GACGACGGAA
GATTTGATCG CGGATCTCGC GGTGCGGGTG GGCGATGGGT TGCGCGTCCG TGTGGCGTCC
GAGGGGCTGT TGGGCACGTC GTTGATCCTG GAGCTGCATG AGGACGAGGA CCCCGATGGC
CAGCAGTTGG CCACGGATCT GATCGAGACG CCGCTGATGC CTTCCTCACC ACCCAATGTG
ACGGAGGCCT CTGCCGATCT GGATGCCATT GTGGCGCGTG TGGCGGCCCT GCCGATTGAG
GACCTGATGA ACTCCGCCAT CGACGCGCTG GACGGCATCA CGCGGCTGTC CACGGGCGAG
GAGATCAACG CGCTTCCCGC TAACCTGAAT GAACTGGTGT CTGAGGCGCG CTCCATCGTG
GCGGCCGAGG AAATCGCCAC GATCCTCACC GATTTGTCGG ATGCGGCGCA GTCCGTGCAG
GAATTGTTCA CTGGTATCGC CGACAGCGAT GGCCTGACCA CGGCGCTGGC CGCGTTGGAA
GGCAGCGACA CGATCATGGC GAACCTTGAG GGCTTCAGTG GCAGGCTGCC CGGGGTGTTG
ACGTCGGTGG AGGAGCTGAT CGCGCAGATC GACACCGCGC CGCTGACGGC TGCGGCCACC
TCTGCCGATG AGGTTTTGCA GCGTATCGAC ACGATCCTGA GCGCGCCGAG CGCCGAGACC
CTGCCCGACG ACCTCGCCGC CCTGATAGCG GAGGCCCGTG CCGTCGTTGC GGGCGATGAC
GTGGCCACGA TCCTGACCGA TCTGGCAGGG GCTGCGGACA CCCTGCAAAC GCTGGTCACA
GGGATCGCCG ACAGCGAAGG GTTGAGCACG ACGTTGACCG CGCTGGAAGG CACCGACACG
ATTATCGCCA ACCTGCAAGG CTTCACCGAA GGGTTGCCCG ATGTCCTGAC CTCAGTGGAG
GAGGTGATCG CGGGCGTGGA TGTGTCCCCG GTCACGGCGG CGGCCAATTC GGCGGACCGC
GTATTGCTGC GCATCGAGGA CATTCTGAGT TCAGAGAGCG CCGATGGGCT GCCGGACACG
CTCAACACCG CGCTCACGGA ACTGGGCGCG ATCCTGGCCA CGCTGCGCGA AGGCGGCGCG
GCAGAAAACC TGACGGGCAC TCTGAGCTCC GCCGACAGCG CGTTTTCCGC GCTGCAATCG
GCAGCCGAAC AGGTGCCCGC GATTGTCACC CGGCTGAATT CACTGGTAAC CTCGCTGCAA
GGGCTGGCGG CGGATTATGA CGACAGCTCT CCGGTCAACC GGGATCTGCG CGCCGCGATT
GCCGATATCA GCCAGGCCGC TGATGCCTTC CGGTCTCTTG CCCGCGCGAT TGAGCGCAAC
CCGAACTCCC TGATCACAGG ACGTTGA
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| Protein sequence | MAERDLPEPE ITARRGITLS WVWLMPVFAL AISAFVVLQA WRGQGPIIVV TLPSASGVEA
GETPLRFRDV QVGEVEELEF SDGFGAVEAH IRIDSDVAPY VDADAEFWLV EPEVTARGVT
GLSTVLSGVY FEGTWDGDIG EPQDRFAIRD DTPLSLPGER GTRIVLRSRD GGQLAAGAPV
LYNGIEVGRL GVPILSENGT IVTMDAFIEA PHDARLSTNT RFWDISGISV DLNASGLSVN
FDSLASLLEG GVTFQSLVTG GEPVEEGQLF DVFTSREEAQ RSVFVAAVEQ VLPLSVVMPT
DDLRLGLGAL VRYRGIRVGE VTNIIGFTDP RAPEDGVQIL VTFSIAPARI GLTGDGATTE
DLIADLAVRV GDGLRVRVAS EGLLGTSLIL ELHEDEDPDG QQLATDLIET PLMPSSPPNV
TEASADLDAI VARVAALPIE DLMNSAIDAL DGITRLSTGE EINALPANLN ELVSEARSIV
AAEEIATILT DLSDAAQSVQ ELFTGIADSD GLTTALAALE GSDTIMANLE GFSGRLPGVL
TSVEELIAQI DTAPLTAAAT SADEVLQRID TILSAPSAET LPDDLAALIA EARAVVAGDD
VATILTDLAG AADTLQTLVT GIADSEGLST TLTALEGTDT IIANLQGFTE GLPDVLTSVE
EVIAGVDVSP VTAAANSADR VLLRIEDILS SESADGLPDT LNTALTELGA ILATLREGGA
AENLTGTLSS ADSAFSALQS AAEQVPAIVT RLNSLVTSLQ GLAADYDDSS PVNRDLRAAI
ADISQAADAF RSLARAIERN PNSLITGR
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