| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1555 |
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| Symbol | |
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| ID | 3934003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1525765 |
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| End bp | 1526922 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637903906 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_509497 |
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| Protein GI | 89054046 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.294968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.931428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGG ATATCGCCAT CAGCAGCGTC ACGGCAGGCA TTTGCCTGTT TTGCGCGCAT
CTCCTGCTGC TCAGGCGGCG AGACACTGGG GTTTATCTGC CCCTTGCCTT GTTATTCCTG
TTCCAGGGGA TCTCTACCGG CGTTGCCGCA CTGGCCGGAA CATATGATCC GGATAGTTTG
GGCATCCTTT TCCGCATCAG CATCATTGTC GGTGGCCTGG AAATCACCCT TCCGTTTCTT
CTTTGGGTCT ATGTGCGGGC GCTGACAACA GAAGGCCAAA CGGAACGTAT CCCGAAATTG
CCGTATCACG TGATCCCGAT TGTTCTGGTT GTCCTCGCAT TCTGGTCGCT CTTGTTTCTT
CCAGACGGAT TTGCAGACAC CGAATTGGAA GATGATGACC CGCGTTTGTT GGGATTTGTC
GCTATCGCGC TGGCCGTTAT GCTTGCGGAT ATTGCGTTCA AAGCGATGGT AGCCACTTAC
ATCTACCTGA TCATCCGCCG CCTCATGGCC TATCGCACGC GTCTAAAGGA TGTGTTCGCC
AGCACCGAAA ACCGAGAACT AACTTGGATA TGGGTGATCT TGATTTGCAT GGCGGTCTAC
CTCAGCGTGA GTATCGCCTT TACCGCGTCG ATTGTGTCCG GTGTTTTTGC CGAAGAAACC
CAAGAAACGT GGTTGCCGAC GCTGAACGGT ATCGCGCTTC TTGGATTGTT CTGGGCCCTT
GGCGTCTGGG GGTTGCGGCA GCGTCCCGGC CTGACGCGGC AGCCCGTCGT CGCCGCCCCG
GAGCCCGATG ATCCCAAGCC GCGAAAATAT GAGAAATCCG CGCTTGATGA CGAACGGCTG
CAACGCATTG CCCGGAAGGT TGAGGCGGCG ATGGCCGAAG ACACCCTCTA CCGTGATCCC
AACTTATCAC TTTGGGATCT GGCAAAGCAC ATTGGCGTCA CGTCTCACTA TGTGTCTCAA
GCGCTGAACA CCCATCTGAA CAAGAGTTTC TTTGACCTGG TGAATGGATG GCGGATCAAG
GATGCCATCG AACAGTTGAC CACGACAGAT GAGACCATCT TGACGATTGC CTATGACGTC
GGCTTCAACT CCCGCTCCGC ATTTTATAAA GCGTTCAAAC GCGAAACAGG GCGAACCCCT
TCTGACCTGA GAAACTAG
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| Protein sequence | MTLDIAISSV TAGICLFCAH LLLLRRRDTG VYLPLALLFL FQGISTGVAA LAGTYDPDSL
GILFRISIIV GGLEITLPFL LWVYVRALTT EGQTERIPKL PYHVIPIVLV VLAFWSLLFL
PDGFADTELE DDDPRLLGFV AIALAVMLAD IAFKAMVATY IYLIIRRLMA YRTRLKDVFA
STENRELTWI WVILICMAVY LSVSIAFTAS IVSGVFAEET QETWLPTLNG IALLGLFWAL
GVWGLRQRPG LTRQPVVAAP EPDDPKPRKY EKSALDDERL QRIARKVEAA MAEDTLYRDP
NLSLWDLAKH IGVTSHYVSQ ALNTHLNKSF FDLVNGWRIK DAIEQLTTTD ETILTIAYDV
GFNSRSAFYK AFKRETGRTP SDLRN
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