| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1464 |
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| Symbol | |
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| ID | 3933911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1433261 |
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| End bp | 1434751 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903814 |
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| Product | ABC transporter related |
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| Protein accession | YP_509406 |
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| Protein GI | 89053955 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00931771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT TAGATCGAGC AACATTGTTG GACGCCACAG GTGTCGCCAA AAGTTTTGGG
GCGGTGCGGG CGTTGACCGA TGCAAGTCTG CACGTGGGCG CCGGTGAAGT GGTCGCCCTT
ATGGGGGCCA ACGGCGCTGG AAAATCGACG TTTGTGAAGA TCCTGACTGG TGCGTTACGA
CCTGATGCAG GCCGCGTTTT GATCAGGGGC GAAGTCGCGC GCACGGGCTC ACCCGCGCAG
GCGCGGCGAT CGGGCCTTGT GCCTGTTTAC CAGGAGCCAT CGCTGATCCC CGACCTTGAC
GTTGCGGATA ACCTACGCCT TGGTGATACG CCAAGCGACG CGGTGCTACA TTGGATGAAT
GAGCTTGGGA TCAATGGGTT ACGCTTTGAT GACATGATCT CGGATCTGCC GCTGGCAACG
CTGCGTATCC TGGATCTGGC GCGGGCGCTT GCGAGCCAAC CCGACGTTCT CCTCCTCGAT
GAGATGACCG CCGCCTTGCC CACGAACCTG GTGGAAAATG TCCTTCGCGT TGTGCGTGCG
CAGGCCGATG CGGGGTGCGG CGTTATCTAC ATCTCCCATC GGTTCACGGA AATCGCGGAG
CTTTGCGACA GCGCCACGAT CCTGCGCGAT GGGCGGACGG TCGGTGATCT GCAGATCGAG
CCAGGGGTTG AAAATCGCTG CGTTGAATTG ATGCTTGGGG CGAAGCTGAG CCTCGACAAA
CGTGACGCCG GCGCGCTGCG TCAGAATACT GGCGTGCCAC GCCTGCGCGC CAGCCAGATT
GCGGTGGCCC CCACGGTCAG CGACGTCTCA TTTGATCTCT ATCCCGGCGA GGTTCTGGGC
GTCGTGGCCC TTGAAGGGCA GGGCCAGGAC GAGGTGTTTA ACGTACTGTC TGGCCATCAA
AAACCCACCG GTGGCGCGTT GCAGGTTGAT GGGACCAGTG TCAGCTTCAG CCATCCCGCC
GATGCGATCG CGGCGGGGCT CAGCTATGTC CCTGGGGACC GGGCGGAGGC GCTGTTGCGG
GAGCGCTCGG TGCGCGAAAA CATCGCGCTT CCTTTCTCTG CCAGGCTGCG GGATTGGGGG
CCATTGAAAA CGCGGCATGA GCGTCACCGC GTTGATCATG CAATAGAAAA ACTGCAAATC
GATACCCGCG CCCAGGGTGA GGTTCAGCGG CTATCCGGGG GCAATCAGCA GAAGGTGACC
ATAGGACGAT GGCTGGCCCA TGGTGTGCGA ACCCTGCTTC TGTTTGATCC GACGCGCGGT
ATTGACGTGC GGACGAAACG GCAGATTTAC CCCTTGGTGC GTGAGCTGGC TGAGCAAGGC
GCAGCTGTGT TGTTCTACAC CTCCGAGTTG GACGAAATTC CGCTGGCCTG CGACCGGGCT
ATCGTTATTT TCAACGGGCG GGTCGTGAAT GTGGTCAATG CCGCCGACGC CACGGAAGAG
GTCTTGATGC GCGCGGCCTA CGGGCTCACG GATGTGAGCG CGGCGTCATG A
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| Protein sequence | MSDLDRATLL DATGVAKSFG AVRALTDASL HVGAGEVVAL MGANGAGKST FVKILTGALR
PDAGRVLIRG EVARTGSPAQ ARRSGLVPVY QEPSLIPDLD VADNLRLGDT PSDAVLHWMN
ELGINGLRFD DMISDLPLAT LRILDLARAL ASQPDVLLLD EMTAALPTNL VENVLRVVRA
QADAGCGVIY ISHRFTEIAE LCDSATILRD GRTVGDLQIE PGVENRCVEL MLGAKLSLDK
RDAGALRQNT GVPRLRASQI AVAPTVSDVS FDLYPGEVLG VVALEGQGQD EVFNVLSGHQ
KPTGGALQVD GTSVSFSHPA DAIAAGLSYV PGDRAEALLR ERSVRENIAL PFSARLRDWG
PLKTRHERHR VDHAIEKLQI DTRAQGEVQR LSGGNQQKVT IGRWLAHGVR TLLLFDPTRG
IDVRTKRQIY PLVRELAEQG AAVLFYTSEL DEIPLACDRA IVIFNGRVVN VVNAADATEE
VLMRAAYGLT DVSAAS
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