| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1442 |
|---|
| Symbol | |
|---|
| ID | 3933889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1409552 |
|---|
| End bp | 1410316 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637903792 |
|---|
| Product | 4Fe-4S ferredoxin, iron-sulfur binding |
|---|
| Protein accession | YP_509384 |
|---|
| Protein GI | 89053933 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC TTCCCACATC CACCCAAAAG AAACTCGGCC TTGTCATCGA CCTCGACACT
TGCGTCGGCT GCCACGCCTG TGTGATCTCC TGCAAAGGCT GGAACACGGA AAACTATGGC
GCGCCGCTCT CTGATCAGGA CGCCTACGGG GCCAACCCCA CGGGCACCTT CCTCAACCGC
GTGCATTCCT ATGAAGTGCA GCCGCTGGCG ACCTCAACCA AACCGCATCC GGCGGCCCAA
ACCATCCATT TCCCCAAATC CTGCCTCCAC TGCGAAGACG CGCCCTGCGT CACCGTCTGC
CCCACCGGCG CCTCCTACAA GCGCGTGGAA GACGGCATCG TTCTGGTCAA CGAGACCGAC
TGCATCGGCT GTGGCCTTTG TGCCTGGGCC TGCCCTTACG GCGCGCGCGA ACTCGACCAG
GACGAAGGCG TGATGAAGAA ATGCACCCTC TGCGTCGACC GGATCTACAA CGAAAACCTT
GAAGAGGTGG ACCGCGTCCC CTCCTGCGTG CGGACCTGCC CCGCAGGCGC GCGCCACTTC
GGCGATCTGG GCGATCCCGA CAGCGACGTC AGCATTCTGG TCAAAGACCG CGGCGGCATC
GACCTGATGC CCGAACAGGG CACCAAGCCC GTCAACCAAT ACCTGCCGCC CCGTCCCAAG
GACGACCTGC CGGAATTCGA CGTCCTGGCC CCCTACCTTG AACCCGTCAC TGAGACCCCC
GGCGGCTTCA TCGGCTGGCT CGACCGCGCG CTGGAGAAAA TCTGA
|
|---|
| Protein sequence | MTQLPTSTQK KLGLVIDLDT CVGCHACVIS CKGWNTENYG APLSDQDAYG ANPTGTFLNR
VHSYEVQPLA TSTKPHPAAQ TIHFPKSCLH CEDAPCVTVC PTGASYKRVE DGIVLVNETD
CIGCGLCAWA CPYGARELDQ DEGVMKKCTL CVDRIYNENL EEVDRVPSCV RTCPAGARHF
GDLGDPDSDV SILVKDRGGI DLMPEQGTKP VNQYLPPRPK DDLPEFDVLA PYLEPVTETP
GGFIGWLDRA LEKI
|
|---|
| |