Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1425 |
Symbol | |
ID | 3933872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 1394837 |
End bp | 1395787 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637903775 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_509367 |
Protein GI | 89053916 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000184688 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.493371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAT TTTTCAAAAC CCTGGCTGTT TCCGCCGTCG CCCTGATGGG TGCCACGGCC GTGAACGCCG ACGGCCATAT CGGCGGGGAG CGCTATGTGC TGGTCAGCCA CGCGCCCGAC AGTGACAGCT GGTGGAACAC GATCCGCAAC GCCCTGACAC TGGCGGGCGA GCAGATGGAT GTGGAAGTGG AATACCGCAA CCCGCCTACC GGTGACATCG CCGACATGGC GCGTCTGATC GAGCAGGCGG CGGCCTCTGG CCCCGACGGC ATCATCACGA CGCTGGCGGA CCCGACGGTT CTGAACGATT CCATTCGCGC CGCCGTAGAT GCGGGCATCG ACGTGATCAT CATGAATTCC GGCACGCCGG AGCAGGCGCG CGACGTGGGC GCTTTGATGT ATGTGGGTCA GCCCGAATAT GACGCAGGTT TTGCCGCCGG TCAGCGCGCG GCAGGCGATG GCGTGACCAG CTTCCTGTGC GTGAACCACG TGATCTCCAA CCCCGTCGTG GCCGAGCGCT GCAACGGCTT TGCGGACGGT CTGGGCGTGG ATCTGGGCGA CAGCATGATC GACGCAGGTC AAGACCCGCA GGAGATCCAG AACCGGGTCA TGGCGTATCT GAATGCCAAC CCCGATACGG ACGGCATCCT GACGCTCGGG CCGACCTCTG CCGATCCCAC CATCCTGGCG CTGGAAGAGC TTGGCCTGGC CGGTGACATC TACTTCGGCA CGTTTGATCT GGGCGAAAAC ATCGTGGCGG GCATCCGCGA CGGCGTGATC GAATGGGGCA TCGACCAGCA GCCGTTCCTG CAGGCCTACC TGCCGGTCGT CGTGATGACC AACTATCACC GCTATGGCGT GCTGCCGGGC AACAACATCA ACTCCGGCCC CGGTTTCATC ACCGCTGACG GTCTGGAGCT GGTGGAAGCG CTGGCGGGCG AATACCGCTA A
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Protein sequence | MNAFFKTLAV SAVALMGATA VNADGHIGGE RYVLVSHAPD SDSWWNTIRN ALTLAGEQMD VEVEYRNPPT GDIADMARLI EQAAASGPDG IITTLADPTV LNDSIRAAVD AGIDVIIMNS GTPEQARDVG ALMYVGQPEY DAGFAAGQRA AGDGVTSFLC VNHVISNPVV AERCNGFADG LGVDLGDSMI DAGQDPQEIQ NRVMAYLNAN PDTDGILTLG PTSADPTILA LEELGLAGDI YFGTFDLGEN IVAGIRDGVI EWGIDQQPFL QAYLPVVVMT NYHRYGVLPG NNINSGPGFI TADGLELVEA LAGEYR
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