| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1422 |
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| Symbol | |
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| ID | 3933869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1391507 |
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| End bp | 1392400 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637903772 |
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| Product | xylose isomerase-like |
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| Protein accession | YP_509364 |
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| Protein GI | 89053913 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0452084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.457038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATTC GTATCGGTAA CGCACCTTGT TCGTGGGGTG TGGAATTCGC GGACGATCCA
CGAAATCCAA CTTGGCAGTC GGTCCTGGAG GACTGTGCGG CGGCAGGCTA CAAGGGGATC
GAGCTGGGGC CGGTGGGCTT CATGCCGGAG GATCCGAACA TCCTTGGCGA TGCGTTAGCC
CAGAATGATC TGGAGTTGAT TGGGGGCGTT GTGTTCCGGC CCTTTCACGA CCCTGACGCT
TGGGACGACG TATTGGACGG TTCGGTACGA ACCTGCAAAG CGCTCTCTGC CCATGGCGCG
CAACACCTTG TTCTGATTGA CTCTATCTCA CCTCGCCGTG CGCCAACTGC GGGCCGGGCT
GAGACGGCAG AACAGATGGG TAAGGCCGAG TGGATCGCCT ATCGGGACAG GATCGCCCAG
ATCGCGCGCA TGGGGACGGA GGAGTATGGA TTAACTGTTG GCATCCATGC CCACGCGGCG
GGGTTCATGG ACTTCGAGCC AGAGCTGGAC CGGCTGCTGG ACGAGGTGCC TGAAGACATC
CTGAAGATAT GCTTTGACAC AGGCCACCAC TCCTACGCCG GCTATGATCC CGTGGCATTC
ATGGCCCGTT CGATTGATCG AATTTCCTAC ATGCATTTCA AAGATATAGA TCCGATTGTT
AAAGCTGACG TCATCACGAA CGGCACGGAC TTCTACACAG CCTGTGGACA AAAAATCTTC
TGCAATCTGG GACAGGGCGA TGTGCAGTTT GAAGCTGTGC GTAAGATTTT GATCGATGCG
GGATTTGAGG GCTGGTGCAC CGTGGAACAG GATTGCGATC CCCTGTTGGA CGTGCGGCCG
CTGGATGATG CGCGAGCCAA CCGGAAATAC CTTGAATCTA TTGGCTTTAA TTGA
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| Protein sequence | MTIRIGNAPC SWGVEFADDP RNPTWQSVLE DCAAAGYKGI ELGPVGFMPE DPNILGDALA
QNDLELIGGV VFRPFHDPDA WDDVLDGSVR TCKALSAHGA QHLVLIDSIS PRRAPTAGRA
ETAEQMGKAE WIAYRDRIAQ IARMGTEEYG LTVGIHAHAA GFMDFEPELD RLLDEVPEDI
LKICFDTGHH SYAGYDPVAF MARSIDRISY MHFKDIDPIV KADVITNGTD FYTACGQKIF
CNLGQGDVQF EAVRKILIDA GFEGWCTVEQ DCDPLLDVRP LDDARANRKY LESIGFN
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