| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1386 |
|---|
| Symbol | |
|---|
| ID | 3933833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1355814 |
|---|
| End bp | 1356479 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637903736 |
|---|
| Product | class II aldolase/adducin-like |
|---|
| Protein accession | YP_509328 |
|---|
| Protein GI | 89053877 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.585457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0870793 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACT ACCCCGACCT CCACGACGTC ATGGACGCCC TGATCGCCAC CGCAAAACGC
TGCTTTGTGG GCGGTTTGCA GACCAATGCG GGCGGCAACC TGTCAGCGCG GCTGGCCAGC
CGGGATGCCA TCGTCATCAA ACCGTCCGGC GTTGGGTTCA ACGAATGCAC ACGCGATAAC
CTGCAGGTGG TGATGCTGGA CGGGACGATC CTGCCATCGG AGGTGGCGCT GAAACCGTCC
AAGGACCTGG ATTTCCACCT GGATCTCTAC CGCATCCGAG AGGATATCAA CGCCATCGTC
CACTGCCACA GCCCCTGGGC CACGGGCTAT GCCAGCGCGG GGATTGAGAT CCCGTGCCTC
ACGGTCCAGA CCATCGAGAA GATCGGGCGG ATGCCGCTGA TCCCGCTGTC ATCGAACGGC
GGCCCCCAGA CGGAGGTGGA GATCAGCCCC GTGTTCCGCG ACCCCAACAT TCGCGCCGCT
GTGCTGGCCA ATCACGGCAC GATCGGGGCC GGGCCGACGC TGATGGCCGC GCAATATCTG
GCAGAGATCA TCGAGGAAAC AGCCCATATC GCCTATGTCC GCGATACCCT CATGGCCGCT
CATGGCAAGA CCCAGGCGGA CCTGCCACAA TACGGCACGG CAGCGGATGC GCGCGCGGCT
GGATAA
|
|---|
| Protein sequence | MSDYPDLHDV MDALIATAKR CFVGGLQTNA GGNLSARLAS RDAIVIKPSG VGFNECTRDN
LQVVMLDGTI LPSEVALKPS KDLDFHLDLY RIREDINAIV HCHSPWATGY ASAGIEIPCL
TVQTIEKIGR MPLIPLSSNG GPQTEVEISP VFRDPNIRAA VLANHGTIGA GPTLMAAQYL
AEIIEETAHI AYVRDTLMAA HGKTQADLPQ YGTAADARAA G
|
|---|
| |