Gene Jann_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1358 
Symbol 
ID3933805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1322408 
End bp1323310 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content63% 
IMG OID637903708 
ProductATPase, BadF/BadG/BcrA/BcrD type 
Protein accessionYP_509300 
Protein GI89053849 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.541544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTGT ATTGGCTTTG TATGGCTCAT GTAAGCGATT CATCCATAAT CGGCGTCGAC 
GGCGGGGGAA CGACCTGTCG CTTTGCGCTT GTGCATGGGG GTCGTCGATA TGATGTTCAG
AGGCGGGCGG CCAATGCGAC CACCGATCCG GTTGGCGCGC TTGCGGCGCT GCAAGAGGGT
CTGTCGGCAC TCGCGCAGGC CGCCAATATT CCAATGACTG AGCTGGAGAC GTTTCCCGCT
TTCTTGGGGT TGGCGGGAGT TGTGGATGAC ACAATCGCAC GTGATCTGGC GCAGGCCCTG
CCGTTGCAAA CTGTCCGGAT CGAGGATGAC CGTCGATCCG CGATGGTGGG CGCGCTCGGC
ACATCGGATG GATGCGTGAT CGGGATCGGC ACCGGGTCCT TTTTCGGCCG GCGGGTTGAT
GCGCGCGATC GGATAATCGG CGGATGGGGG TTTATCTTGG GTGATGCTGC ATCGGGCGCC
GATTTGGGAC GGCATCTGTT GCGATGTGTT CTGGAGGTGC ATGACGGATT GCGGGACGCG
ACGGCACTCA CCGACCATAT GCTGGCGAAA TTCGGTTCCG TTGCGGGCGT CGTCGCGTTC
GCGACATCGG CCAAGCCGGG TGACTTTGCG GGCTTTGCGC CGCAGATCGT TGCTGCCGCG
CAGGAGGGCG ACAAGGTCGC CTGCCACCTG ATGAACCAGG GTGCGCAAAA CGTCAGTGAT
GCGCTGCGGG ACCTTGGATG GCAGCAGGGG GAGCGGATCT GCGCCTTGGG CGGGCTTGCA
CCGCACTACG CCCCCTACCT GCCAGCCGAC ATCGCAGCCC ATCTGGCGGA GCCTGCGGGC
ACAGCGCTGG ACGGCACGCT GATCCTTGCG GCGCAATTGA CCCCGATGGG AGAGACGGCA
TGA
 
Protein sequence
MVLYWLCMAH VSDSSIIGVD GGGTTCRFAL VHGGRRYDVQ RRAANATTDP VGALAALQEG 
LSALAQAANI PMTELETFPA FLGLAGVVDD TIARDLAQAL PLQTVRIEDD RRSAMVGALG
TSDGCVIGIG TGSFFGRRVD ARDRIIGGWG FILGDAASGA DLGRHLLRCV LEVHDGLRDA
TALTDHMLAK FGSVAGVVAF ATSAKPGDFA GFAPQIVAAA QEGDKVACHL MNQGAQNVSD
ALRDLGWQQG ERICALGGLA PHYAPYLPAD IAAHLAEPAG TALDGTLILA AQLTPMGETA