| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1321 |
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| Symbol | |
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| ID | 3933768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1285222 |
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| End bp | 1286070 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903671 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_509263 |
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| Protein GI | 89053812 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.889604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA CATGGTTTAT CACCGGCGCA TCTTCCGGCT TCGGGGCTGC CTTCGCCCGC
CACGCGCTGT CCCAGGGCCA CAACGTTGTG GTCACCGCGC GCCGCCTTGG CAAACTGCAA
CAGATTGCGG CCATCGCCCC AGGCAGGGTT CTTGCTTACG CAATGGATGT CACGGACCCC
ACGCAAATCA CCGAGGCGGT CAAAGCCGCA GAAGACAGGT TCGGCGGCAT CGATGTGCTG
ATCAACAATG CGGGCTACGG CATTGTGGGC GCGGTCGAGG AAACGCCGGA GGCCGAGTTG
CGCGCCATGA TGGAGACGAA CTTCTTCGGC GCCGTCGCCG TCACCCAGGC CGCCCTTCCG
ATGATGCGCA AGCGGCGCAA GGGGGCCATC GTTATGATGT CGTCGCTGGG CGGGCAGCTG
TCGTTCGGTG GCTTCGGGCC TTACTCCGCC AGCAAGTTCG CGCTGGAAGG GATGACCGAA
GCCCTGGCCC AGGAGATCGC GCCCTTCGGT CTGAAGGCCA TGATCGTGGA GCCCGGCGCC
TTCCGCACGG AATTTGCCGA TACCGCCCTG CGTCACATGC CCAAGATCGA CGCATACGCC
GACATCGTTG GCGGCACGCG GGACTTCGCC AGCGGCATGC ACGGCACCCA AGCCGGAGAT
CCATCGAAAG CCGCCGCTGC ACTTGAAACG GCGCTGGGTA GCGACACCAC ACCGCTGCGT
CTGGCGCTAG GTGACGATGC CGTCGAAGCC ATCCGCGACC ATTCCGAAGC CTTGCTGGCC
GAGTTGACCA AGTGGGAGCC TGTCACCCGC GCGGTCAACC ACGACGATGC CGTGGCAGAC
GCCGCTTAA
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| Protein sequence | MTQTWFITGA SSGFGAAFAR HALSQGHNVV VTARRLGKLQ QIAAIAPGRV LAYAMDVTDP
TQITEAVKAA EDRFGGIDVL INNAGYGIVG AVEETPEAEL RAMMETNFFG AVAVTQAALP
MMRKRRKGAI VMMSSLGGQL SFGGFGPYSA SKFALEGMTE ALAQEIAPFG LKAMIVEPGA
FRTEFADTAL RHMPKIDAYA DIVGGTRDFA SGMHGTQAGD PSKAAAALET ALGSDTTPLR
LALGDDAVEA IRDHSEALLA ELTKWEPVTR AVNHDDAVAD AA
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