| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1318 |
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| Symbol | |
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| ID | 3933765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1282615 |
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| End bp | 1283499 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637903668 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_509260 |
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| Protein GI | 89053809 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.761239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGCGCC GTTACGAAGA TATTTATCCG TCCCTCCCGT TGCTTAACAG CGATGGGCTG
GAGCACATGT CGGCCGCGTC TCTGATGTCC GTGCGCTACT TTCAGGCAGA GCCGGACCGG
ATGCCGGAGG ATGTTTTTGC CGAGCACCAC ATCCTTCTGA ACCTCAAGGC CGAGCCGCAC
CGCGTGCAGA ACACCCGCGA TGGTGAGATG CGGGATTTCA CCTTTTCCAA GAACGACATC
ATCGTCACAC CTGCAGGCAT GCGCTCGGGC TGGCGTTGGT TTGCGCAATC CGATGTAATT
GTCGTCACCC TCCTGCCTGA CCGGGTGCAG CGCTTTGCCG AAACCGAGTT GGGGCTGCTT
CTGGACCCAC AGCAATTGGG TGATCTTCCA TTGTTCTCGG ACGCGGACCT CTGCGCGGCG
GGCGTGATGT TGCGCGATGC GTTGGAGGCC GACGATATGA GCTCTGCAGT GATGTTCGAG
GCGCTCAGCC GGGTATTTTT GGTCAAGCTC CTGCAACGTT ACGGCAAACG GCGTCCCGAA
GACGTCGCAC TGTCCTCGCG TTTCACGTCG GCCCATTACA ACCGCGTGCT GGCATTCATC
CGCGCCAATC TGGAGCGCAC GATCACGCTT GATGATCTGG CGTCCGAGGC TGGGATGAGC
CCGTCGCATT TCAGCCGCCT GTTCAAGGAC ACGGTCGGTA CACCGCCAAT GCAATACGTC
ATGGCCTACC GGATCGAGCA ATCGCTTGCG ATGATGACGG ATCAGGGTCG GGCTTTGGGC
GATATCGCCC TGGCCTGCGG GTTCGCCGAT CAGGCGCATT TCAGCCGCAG CTTCAAGCAA
CTGATGGGCG CGACGCCCCG GCAACATCGG TCAAGCCTGA GCTGA
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| Protein sequence | MPRRYEDIYP SLPLLNSDGL EHMSAASLMS VRYFQAEPDR MPEDVFAEHH ILLNLKAEPH
RVQNTRDGEM RDFTFSKNDI IVTPAGMRSG WRWFAQSDVI VVTLLPDRVQ RFAETELGLL
LDPQQLGDLP LFSDADLCAA GVMLRDALEA DDMSSAVMFE ALSRVFLVKL LQRYGKRRPE
DVALSSRFTS AHYNRVLAFI RANLERTITL DDLASEAGMS PSHFSRLFKD TVGTPPMQYV
MAYRIEQSLA MMTDQGRALG DIALACGFAD QAHFSRSFKQ LMGATPRQHR SSLS
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