| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1137 |
|---|
| Symbol | |
|---|
| ID | 3933581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 1098509 |
|---|
| End bp | 1098958 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637903485 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509079 |
|---|
| Protein GI | 89053628 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3238] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.206431 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.232987 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTGT CCGTCACCCT CGTCATCGCC CTCGTGGTTG CAGTGGGCGC AGCGCTCGCC
ATGCAAGCCC CGATCAACGC CGCGCTGGCC CGTGAAGTGG GCGACCCCAC GGCGGCGGCG
GCCATATCCT TTGCCATCGG CTTCGTCGTA CTGGCGGCCA TCGCCTGGTA TCGCGGATCG
TCGATGACAG CCCTCACCTC GCTCAGCGGC GTGCCGTGGT GGGCGCTGAT GGGCGGCGTC
CTGGGGGCGC TGTGGATCTG GGCTGCGATC TGGTCCCTGC CCCGCTTGGG CGTGGTGACG
ATGTTCGGCG CAATGATCCT GGGCCAGCTG ATCGCTGCCA TGGTGCTGGA TGCGCGCGGC
TCCTTCGGGA TGGAGGCGCG CCCCATCGAC CTCACCCGCC TCATGGCCGT CGCCATGGTT
GCAGGCGGCG TGATCCTCTC CAAAGCCTGA
|
|---|
| Protein sequence | MGLSVTLVIA LVVAVGAALA MQAPINAALA REVGDPTAAA AISFAIGFVV LAAIAWYRGS
SMTALTSLSG VPWWALMGGV LGALWIWAAI WSLPRLGVVT MFGAMILGQL IAAMVLDARG
SFGMEARPID LTRLMAVAMV AGGVILSKA
|
|---|
| |