| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1102 |
|---|
| Symbol | |
|---|
| ID | 3933546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 1062584 |
|---|
| End bp | 1063333 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637903450 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_509044 |
|---|
| Protein GI | 89053593 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0231031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0560372 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGA TGCAGTATCT TGAGACCGAG GCGGGGCGCC GGCTGGCGTA TCACAAGTTC
TCGGGCCGCC GGACGGGGGT GGTGTTTCTG GGCGGATTGC GCTCGGATAT GACCGGGTCC
AAGGCGATGC ATCTGGAGGC GTGGGCGCGG CGGTCGGGGC GAGAGTTCCT GCGGTTCGAC
TATTCGGGCC ATGGCGAGTC GTCCGGCGCG TTCACCGATG GCTGCATCAG CGATTGGGCC
GATGACGCCA TGGCCGCCAT TGATGCCCTG ACCGAAGGGC CGCAGGTCAT CGTCGGATCC
AGCATGGGCG GCTGGATCAG CCTTCTGATG GCCAAGCATC GTCCCGACCG GATGGCGGGG
CTTGTGACCA TCGCCGCCGC CCCGGACTTC ACGGAAAACG GCTATTGGAA GGCCTGGGAT
GACGCCAAGC GCAAGACGTT GAAGGAGGAG GGGCAGGTGG CCCTGCCGTC GGAATACGGC
GACGCGATGA TCATCACCAA GCGGCTGATC GAGGATGGGC GCGACCACCT GATCCTGAAC
GACCCCCTGC GCATTGATGT GCCTGTGCGG ATGTTGCAGG GCACGGCGGA TGTCGACGTG
ACGATGGATG TGGCTTTGGG GCTGCTGGAC CATCTGGAAG GGCCCGATAT CCGGCTGGAA
CTGGTCAAGG ATGCCGATCA CCGCTTCTCG GATGCCGCCT GCCTCGACAC GATCACGCGC
GCCATCGAAG AAGTGCTGAC GAATGCGTAG
|
|---|
| Protein sequence | MAEMQYLETE AGRRLAYHKF SGRRTGVVFL GGLRSDMTGS KAMHLEAWAR RSGREFLRFD
YSGHGESSGA FTDGCISDWA DDAMAAIDAL TEGPQVIVGS SMGGWISLLM AKHRPDRMAG
LVTIAAAPDF TENGYWKAWD DAKRKTLKEE GQVALPSEYG DAMIITKRLI EDGRDHLILN
DPLRIDVPVR MLQGTADVDV TMDVALGLLD HLEGPDIRLE LVKDADHRFS DAACLDTITR
AIEEVLTNA
|
|---|
| |