Gene Jann_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_1050 
Symbol 
ID3933494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp1005422 
End bp1005820 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID637903398 
ProductATP synthase F1, epsilon subunit 
Protein accessionYP_508992 
Protein GI89053541 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TGCAATTCGA TCTCGTCTCA CCTGAGCGCC GCCTGGCGTC CATGGAGGTG 
ACCGAGGTTC AGATCCCCGG CGCCGATGGT GATCTGACCG CGATGCCGGA CCATTCACCG
ATGATCACCA CCCTGCGTCC CGGCGTGTTG AAGGTGTCCG GCGCGGAGGG TGAGAAAAGC
TACTTCGTTA CCGGTGGTTT CGCGGATATC GCGGGGCCAT CCGCCACGAT CCTGGCCGAG
CGGGCGATGC CCGTCGAAGA AGTGACCGGA GAGATCGTTG AAGAGCTGAT CAAGGCCTCG
GAAGAGCAGA AATCCGCGGC GTCCGACGGT GCGGCGGATG CGGCCGCCAA ATACCACGCG
GATCTGACCA TGACGCTGGA CGCGATTGTC GGCCGATAA
 
Protein sequence
MATMQFDLVS PERRLASMEV TEVQIPGADG DLTAMPDHSP MITTLRPGVL KVSGAEGEKS 
YFVTGGFADI AGPSATILAE RAMPVEEVTG EIVEELIKAS EEQKSAASDG AADAAAKYHA
DLTMTLDAIV GR