| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1042 |
|---|
| Symbol | |
|---|
| ID | 3933486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 998405 |
|---|
| End bp | 999175 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637903390 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_508984 |
|---|
| Protein GI | 89053533 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC CGCAGATCAT CACCATTCCC TGCCTTCAGG ACAACTACGC CTTCCTGCTG
CACGACCCCT CTACCGGGGC CACCGCCTGC ATCGACGTGC CGGACGCCGC CCCGATCCAG
GCCGCTTTGG GGGCGCAGGG CTGGACATTG ACCGACATTC TTCTCACCCA CCATCATTGG
GACCACATCG ACGGCGTGCC CGCCCTTGTG GAGGCCACCG GCGCGAAGGT CTGGGGCGCG
GCAGCTGACG CCCATCGCCT GCCCCCGCTT GATCACGCAT TGGCGGAGGG CGATACAATC
CGCATCGGCG CGCTGGAGGG CGACGTCATG GATGTCTCCG GCCACACGGT GGGCCATGTG
GCCTTCCACT TTCCCGCCGC GACCGCAGTT TTCACGGCAG ACAGCCTGAT GGCTCTGGGG
TGTGGGCGCC TCTTTGAAGG CACGCCCGCG CAGATGCATG GCTCCCTTGA GAAGCTGAAA
ATGCTGCCGC CCGGGACGCT TGTGTGTTCC GGCCACGAAT ATACCGCGTC GAATGCGCGG
TTTGCATTAA CCATTGAACC GGACAATCCA GACCTTATCT TTCGGGTCGA GCGTATCACC
GCTGCTCGGG CGGCGGGTCA GCCCACCGTT CCCTCCACCC TGGCCGAGGA ATTGGCCACC
AATCCGTTCC TGCGCGCAGA CGCGCCGACC GTTGCCGCGC CTCTCGATAT GGAGGGCGCA
GATCCCGTCG ACGTTTTCAC CCGCATCCGT GCCCAAAAAG ACAGCTTCTG A
|
|---|
| Protein sequence | MADPQIITIP CLQDNYAFLL HDPSTGATAC IDVPDAAPIQ AALGAQGWTL TDILLTHHHW
DHIDGVPALV EATGAKVWGA AADAHRLPPL DHALAEGDTI RIGALEGDVM DVSGHTVGHV
AFHFPAATAV FTADSLMALG CGRLFEGTPA QMHGSLEKLK MLPPGTLVCS GHEYTASNAR
FALTIEPDNP DLIFRVERIT AARAAGQPTV PSTLAEELAT NPFLRADAPT VAAPLDMEGA
DPVDVFTRIR AQKDSF
|
|---|
| |