Gene Jann_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0985 
Symbol 
ID3933429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp941226 
End bp941888 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID637903333 
Producthypothetical protein 
Protein accessionYP_508927 
Protein GI89053476 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.280922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC TTCCCTTTAC ATTTTGCGGT GCGGACCTGT GCGCATTGCC TTCGGGCGCC 
GTCCACTGGC CGGATCAAAA CACACTTGTT GTCAGTGACT TACACCTTGG AAAGTCCGAG
CGAACGGCGC GGCGTGGTGG GCCGATGCTG CCCCCCTATG AGGTGATCGA AACCCTGGAT
CGGCTGCTGC ATGACATCGC TACCACCAAC CCCCGCACCG TGATTTGTCT GGGCGACAGC
TTCGACGATC TCGCGGCCGC CCGCGCGTCC CGAGATGCGG TGTCCGAGCG TCTGGCCCCC
GCCCTGGCCG GACGGCGCTG GATCTGGATC GAGGGCAACC ATGATCCGGG CCCCGTGGAT
TTGGGCGGAG AGCATTTGGC CGACGTGACC CTTGGCCCAT TGACCTTCCG CCACATCGCA
AAACCGACGA CCGCCGGAGA AGTCTCGGGG CATTATCACC CCAAAGCGCG CGTGCGCCTG
CGTGGGCGCA CCATCACGCG GCGGTGCATG TTGATTGACG ACACCCGTTT GGTGCTACCG
GCCTACGGGA CTTATACGGG CGGATTGTTC AGCCACGAGC CGGTATTGGC GACCCTCATG
GCCCCCAATG CGCAAGCAAT CCTGATGGGT CCCGCACCAA CCGCACTTCC AATGCCGCGC
TAG
 
Protein sequence
MNTLPFTFCG ADLCALPSGA VHWPDQNTLV VSDLHLGKSE RTARRGGPML PPYEVIETLD 
RLLHDIATTN PRTVICLGDS FDDLAAARAS RDAVSERLAP ALAGRRWIWI EGNHDPGPVD
LGGEHLADVT LGPLTFRHIA KPTTAGEVSG HYHPKARVRL RGRTITRRCM LIDDTRLVLP
AYGTYTGGLF SHEPVLATLM APNAQAILMG PAPTALPMPR