Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0985 |
Symbol | |
ID | 3933429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 941226 |
End bp | 941888 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637903333 |
Product | hypothetical protein |
Protein accession | YP_508927 |
Protein GI | 89053476 |
COG category | [R] General function prediction only |
COG ID | [COG1407] Predicted ICC-like phosphoesterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.280922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCC TTCCCTTTAC ATTTTGCGGT GCGGACCTGT GCGCATTGCC TTCGGGCGCC GTCCACTGGC CGGATCAAAA CACACTTGTT GTCAGTGACT TACACCTTGG AAAGTCCGAG CGAACGGCGC GGCGTGGTGG GCCGATGCTG CCCCCCTATG AGGTGATCGA AACCCTGGAT CGGCTGCTGC ATGACATCGC TACCACCAAC CCCCGCACCG TGATTTGTCT GGGCGACAGC TTCGACGATC TCGCGGCCGC CCGCGCGTCC CGAGATGCGG TGTCCGAGCG TCTGGCCCCC GCCCTGGCCG GACGGCGCTG GATCTGGATC GAGGGCAACC ATGATCCGGG CCCCGTGGAT TTGGGCGGAG AGCATTTGGC CGACGTGACC CTTGGCCCAT TGACCTTCCG CCACATCGCA AAACCGACGA CCGCCGGAGA AGTCTCGGGG CATTATCACC CCAAAGCGCG CGTGCGCCTG CGTGGGCGCA CCATCACGCG GCGGTGCATG TTGATTGACG ACACCCGTTT GGTGCTACCG GCCTACGGGA CTTATACGGG CGGATTGTTC AGCCACGAGC CGGTATTGGC GACCCTCATG GCCCCCAATG CGCAAGCAAT CCTGATGGGT CCCGCACCAA CCGCACTTCC AATGCCGCGC TAG
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Protein sequence | MNTLPFTFCG ADLCALPSGA VHWPDQNTLV VSDLHLGKSE RTARRGGPML PPYEVIETLD RLLHDIATTN PRTVICLGDS FDDLAAARAS RDAVSERLAP ALAGRRWIWI EGNHDPGPVD LGGEHLADVT LGPLTFRHIA KPTTAGEVSG HYHPKARVRL RGRTITRRCM LIDDTRLVLP AYGTYTGGLF SHEPVLATLM APNAQAILMG PAPTALPMPR
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