| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0956 |
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| Symbol | |
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| ID | 3933400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 915177 |
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| End bp | 916598 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637903304 |
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| Product | homospermidine synthase |
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| Protein accession | YP_508898 |
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| Protein GI | 89053447 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGA CGCATCCGAT TTACGCAAAG ATCGACGGAC CCATCGTTAT GATCGGCTTC
GGGTCAATCG GCAAAGGCAC CTGGCCCCTG ATCAAGCGGC ATTTCGACTA TGATCCCGCC
CGTTTCACCG TGATTGAACC CGACATCCAT CAGCATGATT TTCTGCGCGA GCACGGTCTG
TCCTTCACGG ATGCGGCGCT GACGCCGGAC AATTACCGCG AGGTTCTTGG CACGCTTCTG
GAGCCGGGGA AGGGGTTCTG CGTGAACCTG TCGGTCGATA CCTCGTCGCT GGACTTGATG
CGCTTTTGCC GTGAGATCGA GGTGCCCTAC ATCGACACCG TGGTGGAGCC GTGGGCGGGC
TATTACTTCG GGACGACCGA CAATGCGGCC CGGACGAATT ACGCGCTTCG CCAAGCGGTG
CGGGACGAGA AAGCGGCCAA TCCGGGCGGA TCCACGGCGG TGTCGTGCTG CGGCGCGAAC
CCCGGCATGG TCAGCTGGTT CGTGAAGGAG GGTCTTCTGG CTTTGGCCAA GGACACGGGC
CATGACGTCG ACGCCCCGAA GGATCGCGAG GGGTGGGCCA GGCTGATGCA ATCGCTCGGT
GTCAAAGGCG TCCATATCGC GGAGCGGGAT ACACAGGTGC GTCTTGCCCC GCGCCCGCGC
GATGTGTTCG TGAACACCTG GTCCGTTGAA GGCTTCATCT CCGAAGGGTT CCAGCCCGCC
GAGCTTGGCT GGGGCACGCA CGAGCCATGG TTCCCCGAGA CCGGCCACCG GCAGGACGAA
GGCTGCAAGG CCGCGATCTG GCTGGAGCGT CCCGGCGCCG TGACGCGTGT CCATACCTGG
TGCCCGACAC CGGGTCCGCA ATTCGGCTAT CTGGTCACTC ATAACGAGGC GGTGTCGATC
AGCGATTATT ACACCGTCGG CGAGGGGCAC GAGCCGGAGT TCCGCCCGAC CTGTCACTAC
GCCTACCATC CCTGCGATGA TGCCGTCCTT TCGCTCCATG AGATGTTCGG GGGCGGGGTG
ACCCAGACGG CGCACCACAT TCTGGGCGAG GATGAGATCG TGGAGGGCAT CGACGAGTTG
GGCGTGCTTC TCTACGGCCA CGAAAAGAAT GCGCTGTGGT TTGGCTCGCG GCTGTCGAAT
GAGGAGGCGA AGGGCCTCGC GCCGTATCAG AACGCGACCG GCCTGCAGGT CACCAGCGCG
GTTCTGGCGG GGATGGTCTG GGCGTTGGAA AACCCTGGCG CAGGCATCGT GGAGAGCGAT
GAAATGGACC ATGCCCGCTG TCTGGAAGTA CAGCGCCCGT ACCTTGGCCC GGTGGAGGCC
CATTATACCG ACTGGACACC GCTGGAAAAC CGGTGGGAGC TGTTTGACGA GAACATGGAC
CGCGAGGAAC CCTGGGCGTT CAGAAACGTT CTGGCGACGT GA
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| Protein sequence | MATTHPIYAK IDGPIVMIGF GSIGKGTWPL IKRHFDYDPA RFTVIEPDIH QHDFLREHGL
SFTDAALTPD NYREVLGTLL EPGKGFCVNL SVDTSSLDLM RFCREIEVPY IDTVVEPWAG
YYFGTTDNAA RTNYALRQAV RDEKAANPGG STAVSCCGAN PGMVSWFVKE GLLALAKDTG
HDVDAPKDRE GWARLMQSLG VKGVHIAERD TQVRLAPRPR DVFVNTWSVE GFISEGFQPA
ELGWGTHEPW FPETGHRQDE GCKAAIWLER PGAVTRVHTW CPTPGPQFGY LVTHNEAVSI
SDYYTVGEGH EPEFRPTCHY AYHPCDDAVL SLHEMFGGGV TQTAHHILGE DEIVEGIDEL
GVLLYGHEKN ALWFGSRLSN EEAKGLAPYQ NATGLQVTSA VLAGMVWALE NPGAGIVESD
EMDHARCLEV QRPYLGPVEA HYTDWTPLEN RWELFDENMD REEPWAFRNV LAT
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