| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0890 |
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| Symbol | |
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| ID | 3933334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 844394 |
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| End bp | 845560 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637903238 |
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| Product | major facilitator transporter |
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| Protein accession | YP_508832 |
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| Protein GI | 89053381 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0309289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC CCATCCTTGC ATTGGCAGCC GCCGGGTTTG CCGTTGTCAC GACCGAGTTC
GTGATCATCG GTGTCCTGCC ACGGCTCGCT GCTGATCTTG GCGTCACCAT CGCCCAAGCT
GGTCTTCTGG CAACCATCTT CGCCTTCACC GTCGCAATCG CGGCTCCCTT CCTGACCGCT
TTGGTCGCAA AGATCGAACG GAAAAAGCTG TTCGCAGCCC TACTCGCGAT GATCGCCATA
TCGAACCTTC TGACGGCCAT CGCACCCACA TTTGAGATCT TTGCGGCGGC GCGGGTGGTC
GGAGCTTTGG CCTTGCCGGT CTTCTGGGCG GTCGGCACCG CATCGGCCGC GCAACTTGGC
GGGCCAGAAG GCGGCGGTAA ATCCGTGGCG ATCCTCTATG CCAGCATCTC GGCCGGTACG
GTGATCGGCA TCCCGCTCGG AACGCTGCTG GCTGACCTGA TGGGCTGGCG TGTCATGTTT
GGCGCGATCG GCGTTCTGGC TGCCATCATG TCGCTGGCGC TGCTCGCCTT CTTCCCCACC
ACACCGCCCG ACGCGGCACC TTCGTTGCTG AAACAAGCCT CCATCCTGAA GCGTGGTTCG
TTCCTGGCGC ATCTCGTGCT GACGGCCTTT GCCTTCACGT CGATGTTCGT GGCCTACACT
TATCTGGCTG ATATCCTGCA AACGCTGGCT TCTTTGCCAA CAAGTCAGGT GGCCTGGGTG
CTGATGGGCT TCGGCATTGT CGGCCTCTTC GGCAACTGGC TGGCTGGCCA GTATGTTGAT
CGGAGCCCAA TGGGTGTGAC GGTCGTGTCT CTGGCCGCAT TGTCCATTGC ATCCTTCGCG
ACGGTTGCTC TGACCGGTCA AGGCATCCTG TTCCTGATCC CGCTGGCCAT CTGGGGCGCG
GCGCAATCGG CTGGCTTCAT CGGGAACCAG TTGCGTGTCA TGAAAGAAGC TCCTGAAGCG
CAAGAGTTTG CATCTGCCCT CAGCGTGACC ATCGCGCGGG TTGGAATTGG GCTTGGTGCG
TTGATCGGCG GCAAGGTGAT CGACGCGCGA GGTCTCGCAG CCCTTGGATC AGAGAATGCA
CTGATCGGCA TAGCAGGTCT CGTCGTCGCG ATGCTCATTA TCATCGGCGT CCGCAGAGTG
AGGTGGCATT CCCTGCCAGC AGAATAG
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| Protein sequence | MKRPILALAA AGFAVVTTEF VIIGVLPRLA ADLGVTIAQA GLLATIFAFT VAIAAPFLTA
LVAKIERKKL FAALLAMIAI SNLLTAIAPT FEIFAAARVV GALALPVFWA VGTASAAQLG
GPEGGGKSVA ILYASISAGT VIGIPLGTLL ADLMGWRVMF GAIGVLAAIM SLALLAFFPT
TPPDAAPSLL KQASILKRGS FLAHLVLTAF AFTSMFVAYT YLADILQTLA SLPTSQVAWV
LMGFGIVGLF GNWLAGQYVD RSPMGVTVVS LAALSIASFA TVALTGQGIL FLIPLAIWGA
AQSAGFIGNQ LRVMKEAPEA QEFASALSVT IARVGIGLGA LIGGKVIDAR GLAALGSENA
LIGIAGLVVA MLIIIGVRRV RWHSLPAE
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