| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0880 |
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| Symbol | |
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| ID | 3933324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 835022 |
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| End bp | 836233 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637903228 |
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| Product | ROK |
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| Protein accession | YP_508822 |
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| Protein GI | 89053371 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.185175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0528281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGAT CAAGAAGCCT TTCTCGACAG TTTTCACGTA GCGCCGTGGT TCAGGCGATT
GCGTCCGCGG GCCCGATTTC GAGGGCGAGC TTGGCAAAAC AGGTTGGTCT TTCCAAACAG
ACAGTTTCTG AAATCGTATC CGGCCTCGAG AGTGATGGGT GGATTATCGA AACCGGTCGG
ACCGCTGGTC ACGTCGGGCG ATCAGCAACG ACCTACGAAT TGGTCCCGGA CGCGGCATTT
GTGTGCGGCG TTGACCTCGG TGGCACAAAG GTCCGCGCCG CGATCATCGA TCTGACCTGC
ACCGTCGTGG CCGAGTTGAC CGAACCGACT GATCCGCAAG GTGGCACCGA TCTTGTACAA
CAAATCGGTC AGCTATGCCG GAATGCTGCG CTACAGGCAT GTGTGGATTG GTCTAGGGTT
ATGTTTGCGA CCATTGGCGT CCCCGGTGTC CCGGATCAGA AGTCGGGATC GGTGAAGATG
GCCCCGAATA TCGACAAGAT TGGCGACATG GATTTCGCCG GAGCCTTGGA GGCGGAGTTT
GGCTTCGGTG TTCAGGTCGA AAACGACGTG AACCTCGCCG CGATTGGTGA GCAGTGGAGT
GGCTGCGCGT CCGAAGTCGA TAATATGGCA TTTGTGTCGC TCGGCACAGG CATTGGCGCA
GGGATTATCG TGGGTGGGCA AATCATACGT GGCGCCATGG GGGCGGCGGG AGAACTTGGC
TTTCTGCCGT TCGGGGCGGA CCCTTTCGAG CCTAGCTCAC TCAGAGCGGG CGCCCTGGAG
CGTCAGGCCG GTTCTTTTGG CATGATAGGC CGATATTCGG AACTTGCGGG CAAAGACGTC
CAGGTCAAAG AACTGTTCGA TCTCGCACAG GCCGGAGATG AACACGCCGA CATTGTGCTG
GAAGAGACTG CCCGGCTGGT CGCTCGTTTG ATTGCAACAA TCGGCGCAGT TGTCGATCCG
TCGATGGTTG TCCTAGGCGG GTCAATCGGG CAGCGCAGGG AGCTGCAGGA GCGTATCGAA
GTTGCGCTTG CGGACTGTTT TCCAAACCCG ATCGACATCA GGCGCTCGGC CCTTGGCAAT
CATGCGGCCC TCGTCGGCGG TGCAGCGGTC GGGTTGGCCC ATCTGCATCA CACAATTTTT
GCAGCAGGTC TGAACAATGT GGAGATCGCG CTTCCGCAGC TCTCGGCGCC GGCATGGAGG
GGGGTTGCAT GA
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| Protein sequence | MIGSRSLSRQ FSRSAVVQAI ASAGPISRAS LAKQVGLSKQ TVSEIVSGLE SDGWIIETGR
TAGHVGRSAT TYELVPDAAF VCGVDLGGTK VRAAIIDLTC TVVAELTEPT DPQGGTDLVQ
QIGQLCRNAA LQACVDWSRV MFATIGVPGV PDQKSGSVKM APNIDKIGDM DFAGALEAEF
GFGVQVENDV NLAAIGEQWS GCASEVDNMA FVSLGTGIGA GIIVGGQIIR GAMGAAGELG
FLPFGADPFE PSSLRAGALE RQAGSFGMIG RYSELAGKDV QVKELFDLAQ AGDEHADIVL
EETARLVARL IATIGAVVDP SMVVLGGSIG QRRELQERIE VALADCFPNP IDIRRSALGN
HAALVGGAAV GLAHLHHTIF AAGLNNVEIA LPQLSAPAWR GVA
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