| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0866 |
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| Symbol | |
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| ID | 3933310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 821253 |
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| End bp | 822893 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637903214 |
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| Product | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_508808 |
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| Protein GI | 89053357 |
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| COG category | [C] Energy production and conversion
[T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.100369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAC CGCGCATCGT GATCCTGGGC GGCGGCTTCG GCGGTCTCTA CACGGCCCGG
GCCCTTCACC GCACCTTCCG CGACACCGCC GAGATCGAGG TGATCACGGC CGAGAACTAC
TTCGTCTTCC AGCCTCTGCT GCCCGAGGTC GGCGCAGGGT CTGTCACGCC CATTCACGCC
ACGTCCCCCT ACCGGTTCCT GTTGAAGGGC GTGGGCATCC GCAAGGCGAT GATCGACAGC
GTCGATTTCG CCGCCAAGCG TGTCACCGTG TTCCAAGGCG TCCAGCGCCG CCCGACCGAG
GTGCCCTACG ACCACCTCGT CGTGGCCCTT GGGCAGACCG TCGATCTGTC CCGCACCCCG
GGACTTGAAG CCCACGCCCT GACGATGAAA ACGCTGGAAG ACGCCCGCCG CCTCCGCGCC
CATGTGATCG AACGGCTGGA GCATGCCGAC ATCACCAACC TGCCGGAGGT CAAGCGCGGT
GCCCTGACCT TCACCGTCAT CGGCGGGGGC TTTTCGGGGA TCGAGACCGT GGGGGAGATG
GCGGAATTGA TCGACCGCTC CCTGAAATAT TATCCCAACG TCTCCCGCGA TGAGGTGCGT
ATCATCGTGC TGGAATTCGC CGACAAGGTG CTGGCCGAAA TGCCCGAAAA GCTGCGCGCC
TATGCCCAGG CGCAGCTTGA AAAGCGCGGG GTGGAAGTTT GTCTGAACAC CGGCATCGCC
TCGGCCACCG GCACTCAGAT CACCACCACC GACGGCGATG TGATCGATAC CCGCACCGTA
GTGGCCACCA TCGGCAACGC GCCTGCGCCG GTCGTCAAGC GTATGGACCT GCCCCTGACC
CAGGGCCGCA TCGCGGTCGA ACGCGACCTC TCGGTGCCTG GGCGAGACGG CGTCTGGTCC
CTTGGCGACT GTGCCCTGAT CCCGATGGTG GAGGACGCGA ATGCGCGCGA AGACTACGCG
CCGCCCACCG CCCAATTTGC GGTGCGAGAG GCCAAGCAAC TGGCCGCAAA CATCAAACGC
GCGGTCGATG GCACCGCGCT GAAACCCTTT GAATACACCT CCAAAGGCTC CATGGCGTCC
CTTGGCGCGC GGCGCGGGAT CGCAGATGTC ATGGGCATCC GGCTGACCGG GTTTCTCGCC
TGGGTCCTGT GGCGCGCGTA TTATGTGGCC TTTCTTCCCG GCTTTCCGGC GAAGGTCTGG
GTGCTGAGCC ATTGGGTGCT GGATTGGGTG ACGCCGCGCA GTCTGGTGAA CCTGTCATCC
CCCAAGACCG ACGCCTCGCG CCATATCCGC TATGCCAAAG GCGACCGGAT CTATGAGACG
GGCAACCGCG CCGACACGTT CTTCACGATC ATTGAGGGCG CGGTCGAGAT CACCAACGCC
AAAGGCCACG ACGGCCAGCC CACCACGCGG CGCATTGAGC CCGGCGGACA TTTCGGCGAA
CGGCTGATCC TGGGGGCGAC CCGCCGCGTG GCAACGGCCC GCGCGCTGGA GGATACCGTT
GTGCTGGCCA TGGGTCGGGA CGAATTCCTG AAGCTGACCC GGGCGTTACC GGCGCTGCGC
GATTATTTTG AGGCGCATCT GGCAGAGAAG GGCCTCGATT GGGCACCTGA GCCGGACGAG
CGGCGCGACG CTGCGGAATA G
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| Protein sequence | MGKPRIVILG GGFGGLYTAR ALHRTFRDTA EIEVITAENY FVFQPLLPEV GAGSVTPIHA
TSPYRFLLKG VGIRKAMIDS VDFAAKRVTV FQGVQRRPTE VPYDHLVVAL GQTVDLSRTP
GLEAHALTMK TLEDARRLRA HVIERLEHAD ITNLPEVKRG ALTFTVIGGG FSGIETVGEM
AELIDRSLKY YPNVSRDEVR IIVLEFADKV LAEMPEKLRA YAQAQLEKRG VEVCLNTGIA
SATGTQITTT DGDVIDTRTV VATIGNAPAP VVKRMDLPLT QGRIAVERDL SVPGRDGVWS
LGDCALIPMV EDANAREDYA PPTAQFAVRE AKQLAANIKR AVDGTALKPF EYTSKGSMAS
LGARRGIADV MGIRLTGFLA WVLWRAYYVA FLPGFPAKVW VLSHWVLDWV TPRSLVNLSS
PKTDASRHIR YAKGDRIYET GNRADTFFTI IEGAVEITNA KGHDGQPTTR RIEPGGHFGE
RLILGATRRV ATARALEDTV VLAMGRDEFL KLTRALPALR DYFEAHLAEK GLDWAPEPDE
RRDAAE
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