| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0839 |
|---|
| Symbol | |
|---|
| ID | 3933282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 794499 |
|---|
| End bp | 795212 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637903186 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_508781 |
|---|
| Protein GI | 89053330 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1451] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.243328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCGCTC ATCCATCCGT TTCAACCCAT GTCCTGCCCG GCGACCCGCC GGTGGAGGTG
ATGTTGCGCC GAAATGCGCG GGCCAAACGG TTTTCCCTGC GGGTCAGCCG GTCAGACGGG
CGGGTGTCAC TCTCCCTGCC AACCTGGGCG CCTGAATCTG AAGCACTGGC ATTCCTGCGG
GAGAGAGAGG ATTGGGTGCG GGAGCATCTT GGCCGCTCAC CGGGCGTTCT ACGCGCGCAG
ATCGGGGCGG AAATCCCCGT CTGCGGCATC CCGCGCGCCG TAGTGGCAGG GACCGGCCGC
GCTGCGCGGT TTGTCGACGG CGCGTTGCAG GTGCCCGAAG GCCCGAGGGA GGGACCCCGT
CTCAAAGCGC TGCTGTCGGC CATGGCGCGG GAGCGGTTGT CGGAGGCCGT CGCAATCCAC
GCTGCTGCCA TTGGGAAAAG ATACGGGCGC ATGACCCTGC GCGATCCCCG GTCCCGCTGG
GGCAGTTGTT CGTCGAAGGG CGATCTGATG TTTTCGTGGC GGCTGATCAT GGCCCCACCC
GCCGTACTGG ACTACGTCGC GGCCCATGAG GTTGCGCATT TGGTGGAGAT GAACCATTCG
GCGCGGTTCT GGGCTTTGTG CAAACAATTG TGCCCGACCA CAGACCAGCA CCGCCGCTGG
ATGCGCGCCC ACGGGGCGGA GCTTCTGGCC TGGCGGTTTG AGGCGCAGGA GTGA
|
|---|
| Protein sequence | MAAHPSVSTH VLPGDPPVEV MLRRNARAKR FSLRVSRSDG RVSLSLPTWA PESEALAFLR
EREDWVREHL GRSPGVLRAQ IGAEIPVCGI PRAVVAGTGR AARFVDGALQ VPEGPREGPR
LKALLSAMAR ERLSEAVAIH AAAIGKRYGR MTLRDPRSRW GSCSSKGDLM FSWRLIMAPP
AVLDYVAAHE VAHLVEMNHS ARFWALCKQL CPTTDQHRRW MRAHGAELLA WRFEAQE
|
|---|
| |