| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0838 |
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| Symbol | |
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| ID | 3933281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 793841 |
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| End bp | 794494 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637903185 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_508780 |
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| Protein GI | 89053329 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0913555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATGA ACCCCCGCCC CACGGAAACC GGCGCCGCCG TGGCCCATGA CCGGGTCTAC
CGCGCATTGC GCTCTCGCAT CATGTACGGC GAGGTTGATC CGGGTCAGGC AATGACGTTG
CGCGGCGTGG GGCGCGAGTT TGGCGTGTCG ATGACGCCTG CGCGGGAGGC GGTGCGCCGC
CTGGTCAGCG AGGGTGCGCT GTTCCTGTCA GCGTCGGGCC GGGTCTCGAC GCCGGAACTG
TCGAACGAGC GGATTGAAGA GCTGGCGTCC CTGCGTGCCT TGCTGGAGCC GGAATTGGCC
TCCCGCGCCC TGCCCCGTGC GCATCCCGCG CTGATTGAAC GGATGGAGGC GATCAACGCA
CAAATCGCGC AGGTCATCGC GAAGCGGGAT GCGGTGGCCT ACATCAAGTC AAATCTGGAA
TTCCACAGGA CGCTGTATCT GCGCGCCCAG GCCCCGGCGA TGCTGGCGCT GGCAGAGACG
GTCTGGCTGC AAATGGGCCC CACCATGCGC GCCCTCTACG GTCGGTTGAA ACGCACCGAA
TCGCCGCCGC ATCACCGGCT GATCCTCGCG GCGCTGCGCG CGGGAGATGA GCCGGGACTG
CGGCTGGCCC TGCGGGCTGA CGTCACACAG GGCCTGCGAC TTTTGGCGAA CTAG
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| Protein sequence | MLMNPRPTET GAAVAHDRVY RALRSRIMYG EVDPGQAMTL RGVGREFGVS MTPAREAVRR
LVSEGALFLS ASGRVSTPEL SNERIEELAS LRALLEPELA SRALPRAHPA LIERMEAINA
QIAQVIAKRD AVAYIKSNLE FHRTLYLRAQ APAMLALAET VWLQMGPTMR ALYGRLKRTE
SPPHHRLILA ALRAGDEPGL RLALRADVTQ GLRLLAN
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