| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0819 |
|---|
| Symbol | |
|---|
| ID | 3933262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 776536 |
|---|
| End bp | 777099 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637903166 |
|---|
| Product | glycerol-3-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_508761 |
|---|
| Protein GI | 89053310 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0615] Cytidylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR01518] glycerol-3-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.609533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGCAT CCGGCCCCTT TTTTGTGCGC GGCGCGGGGC GAGATAATCC TTGCGGGGGC
GGGCGCAAGT TGATTCAATC CCGCCAACAA CGGGCGAGGC AGATCTTGGG CAAACGGATC
ATCACCTATG GGACGTTTGA TCTGTTCCAC ATCGGGCATG TGCGCCTGCT CAAACGACTG
GCCGATCTGG GCGATCACCT GACGGTTTGC GTGTCCACCG ACGAGTTCAA TGCGGTCAAA
GGAAAGAAAA CCGTTGTTCC CTATGATCAG CGGGCCGAGA TCGTGGCCGC CTGCCAGTAT
GTGGACGCCG TGTTGCCCGA GGAAGATTGG GAGCAGAAGC GCGACGACAT CGTGCGAGAG
AAGATCGACA TCTTCGCGAT GGGCGACGAT TGGAGCGGCA CGTTCAACGA CCTCAGCGAC
ATTTGCGAAG TGTTCTATTT GCCGCGCACG GAAGATGTTT CCTCGACCTC TCTCAAATCC
TTCATGGAGG CGTTGCGGGA CGAGCAGCTG AAAGAGGTCA AGCATCTGAT CGAGACGTTG
AATGCCAAGG CGTCCGGTTT GTGA
|
|---|
| Protein sequence | MFASGPFFVR GAGRDNPCGG GRKLIQSRQQ RARQILGKRI ITYGTFDLFH IGHVRLLKRL
ADLGDHLTVC VSTDEFNAVK GKKTVVPYDQ RAEIVAACQY VDAVLPEEDW EQKRDDIVRE
KIDIFAMGDD WSGTFNDLSD ICEVFYLPRT EDVSSTSLKS FMEALRDEQL KEVKHLIETL
NAKASGL
|
|---|
| |