| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0801 |
|---|
| Symbol | |
|---|
| ID | 3933244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 762453 |
|---|
| End bp | 763622 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637903148 |
|---|
| Product | ornithine decarboxylase |
|---|
| Protein accession | YP_508743 |
|---|
| Protein GI | 89053292 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTC CCTTTATCGC CCTTTCGGGC GCAGCTCCCG TATCTTCCTC CCGCGCGGAG
GTCTATGCCC GCACCCATAC GTTCGACCGC CCCACGCTGA TCCTCGACGT CGACCGTGTG
GCGCAGCACT ACGACGCACT CTCCGCCGGT CTGGGTCAGG CGCATATCCA CTACGCCGTC
AAAGCCAACC CCGCGCCTGA AATCCTCGCG CGCCTTGTCA CTATGGGCTC GGGCTTCGAT
GCGGCATCAA AGGTGGAGAT CCAGATGTGC CTCGATGCAG GCGCTGCCCC CTCGCACATC
TCGTTCGGGA ACACCGTCAA GAAACCGTCA GACATCGCCT ATGCGCATTC CGTCGGCGTG
GACGTCTTCG CCGCCGATGC GTCTGAGGAA CTGGACAAGA TCGCCACCCA CGCCCCCGGC
GCGCAGGTCT ACATCCGCCT GTTGGTGGAG GCGTCGGGCG CGGATTGGCC GCTCACCCGC
AAATTCGGCA CCACCAAAGC CAACGCGCTG GACCTCATGG CCCACGCCCG TGCTCTGGGT
CTGCGCCCGG TGGGCCTGTC ATTCCACGTC GGCTCCCAAA CCCGCGATCC TGCCATGTGG
GGCCCGGTCC TCGATGGTAT CGCGGACGTC TGGACCACGG CCAAGACACT CGGCTTCCCG
CTGGACCTCC TGAACATCGG CGGCGGCTTC CCCGCGTTCT ACGGCGACGA CATCCCGCAC
CCCACCGCCT ATGCGGCCAA CGTCATGGCG CAGGTCCACA CCCGCTTCGG CGACGTGCCC
CGGATCATGG CCGAACCCGG TCGCGGTCTG GTGGCGGAGG CGGGCATGAT CGCCGCCGAG
GTCCTGCTGG TCGCCCGCAA ATCCCCCGAT GACCTACACC GCTGGGTGTA TCTGGATATC
GGCAAATTCT CAGGCCTCGC GGAAACGATT GATGAGGCGA TCCGCTACCA ATTCGCCACC
GACCGCGATC ATGAGGCGAT GGGCCCCTGC ATCCTCGCCG GCCCCTCCTG TGACAGCGCC
GATGTCCTCT ACGAAAAACG CCCCATCGCC CTGCCCCTGG GCCTGAAATC CGGCGACCGC
ATCTGGATCC GCAATTGTGG CGCCTACACC ACTACTTACG CTTCCATCGG CTTCAACGGC
TTCCCACCGC TGGATGTCGT GGTCCTCTGA
|
|---|
| Protein sequence | MTAPFIALSG AAPVSSSRAE VYARTHTFDR PTLILDVDRV AQHYDALSAG LGQAHIHYAV
KANPAPEILA RLVTMGSGFD AASKVEIQMC LDAGAAPSHI SFGNTVKKPS DIAYAHSVGV
DVFAADASEE LDKIATHAPG AQVYIRLLVE ASGADWPLTR KFGTTKANAL DLMAHARALG
LRPVGLSFHV GSQTRDPAMW GPVLDGIADV WTTAKTLGFP LDLLNIGGGF PAFYGDDIPH
PTAYAANVMA QVHTRFGDVP RIMAEPGRGL VAEAGMIAAE VLLVARKSPD DLHRWVYLDI
GKFSGLAETI DEAIRYQFAT DRDHEAMGPC ILAGPSCDSA DVLYEKRPIA LPLGLKSGDR
IWIRNCGAYT TTYASIGFNG FPPLDVVVL
|
|---|
| |