Gene Jann_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0704 
Symbol 
ID3933147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp675679 
End bp676617 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content62% 
IMG OID637903051 
ProductCBS 
Protein accessionYP_508646 
Protein GI89053195 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.345067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCCGGG TGATACCTTG GAAAGGAGCC ATGAGCTCAA ACCCTGATCC GTCGTCTTCT 
GCGGCGCGTG GCGCGCCCCC TGCAGATATT GAGACCGACG AAGAGACCCC GACCCAGAGG
CCGGGATTTT TTGCCCGCAT TTTCGGGACA GAGGAGCAAG GGCCTGATCC CGAGCTTGAT
CCGTTCCCCG ACAACGCATC GACCCCTCAA ACATTCGGTC CCCGGTTGCC TGGCATCTCA
AACCTGCGGC GCATGCGGGT GGAGGATGTG GCAATCCCCC GGGCCGAAAT CACCTCTGTC
GCCGCCGACA CGGATCTGCC TGATCTGGTG CAGGTCTTCC GCGATAGCGG GCTGACGCGG
CTGCCGGTCT ATGACGGTGC GCTGGACGAA CCTATCGGTC TTGTGCACCT CAAGGACATT
GCACTGCGCC ATGGCTTCAA CGGCGACGGA GAGGATTTTA TCCTGTCCGA AAGCCTGCGC
CCGGTCCTGT ATGTGCCGCC TTCGATGCCC ATTGGCGTTC TGCTCACGAA GATGCAGGCC
GACCGCACCC ATATGGCGCT GGTGATTGAC GAATATGGCG GCGTCGACGG GCTGCTGACC
ATTGAGGATC TGATCGAACA GGTCATCGGT GAGATCGAGG ATGAACACGA CGTTGAAGAG
GCGCAGCCCT GGGTGCGCGA GGACGACGGT GCGTTTCTTG CGCTGGCCCG TGCGCCGCTC
GACGAGTTTG AATCCGAGAT CGGCATGGAG CTGGTTGATG ATGAGGAAGA GGAGGAGGTC
GATACCCTCG GCGGGCTTGT CTTCCTTCTG ACAGGTCGCG TGCCTGCGCG GGGCGAAGTC
GTTCCCCACC CCACGGGCTT GGAGTTTGAG GTGATCGACG CCGATCCGCG CCGCATCAAG
CGGCTGCGCG TGCGTTTGCC TGCCGAGAAG GCCGGTTGA
 
Protein sequence
MARVIPWKGA MSSNPDPSSS AARGAPPADI ETDEETPTQR PGFFARIFGT EEQGPDPELD 
PFPDNASTPQ TFGPRLPGIS NLRRMRVEDV AIPRAEITSV AADTDLPDLV QVFRDSGLTR
LPVYDGALDE PIGLVHLKDI ALRHGFNGDG EDFILSESLR PVLYVPPSMP IGVLLTKMQA
DRTHMALVID EYGGVDGLLT IEDLIEQVIG EIEDEHDVEE AQPWVREDDG AFLALARAPL
DEFESEIGME LVDDEEEEEV DTLGGLVFLL TGRVPARGEV VPHPTGLEFE VIDADPRRIK
RLRVRLPAEK AG