Gene Jann_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0620 
Symbol 
ID3933062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp593454 
End bp594041 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content61% 
IMG OID637902966 
ProductN-acyl-L-homoserine lactone synthetase-like 
Protein accessionYP_508562 
Protein GI89053111 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG3916] N-acyl-L-homoserine lactone synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATGA CAACGCTCTC TTTCGAGAAT TTCCACACCC ACGGCCCGCT ATTCAGCAAC 
ATGCTGAAGG CGCGGCATCG CACGTTCATT GAGGAAATGG GGTGGGAAAT CCCCTCGGAA
GGCAACATGG AATTCGACCA GTATGACACG GCGCAAAGCC GCTGGGTTTG CGTCCATGAC
GGAACGCGCG TGCTGGCTGG TGTGCGCCTG ACGCCCACAA CCGCGTCTTG CGGGATCTAC
AGCTACATGG TGCGCGATGC TCAACGTGGT CTTCTGGATG CGATCCCGGC CAATCTGTTG
GACGACGATG CGCCCATCGC GTCGCATATC TGGGACGCCA ACCGCCTGTT CGTCGCCGAG
GGCGTTGAGA CAGATATCCG CCGGGAGGTT CAGCTGTCTC TGATGGGGCA TATGGTCCGC
TCGGCCCGCG AGTTGGGGGC CACGACGCTT CTGGGCCTGC TGCCCATCGG CATCCCGCGT
CTTGGTCGCC GTCTGGGCAT TGATATGGAG CCGGGCGGGC CGATCATGAA GATCGGTGGC
GTGGCCCACC GCTGCTATTT CGTGACCATG GCCTCGAAAA TGCACTGA
 
Protein sequence
MQMTTLSFEN FHTHGPLFSN MLKARHRTFI EEMGWEIPSE GNMEFDQYDT AQSRWVCVHD 
GTRVLAGVRL TPTTASCGIY SYMVRDAQRG LLDAIPANLL DDDAPIASHI WDANRLFVAE
GVETDIRREV QLSLMGHMVR SARELGATTL LGLLPIGIPR LGRRLGIDME PGGPIMKIGG
VAHRCYFVTM ASKMH