| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0586 |
|---|
| Symbol | |
|---|
| ID | 3933028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 573124 |
|---|
| End bp | 573588 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637902932 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_508528 |
|---|
| Protein GI | 89053077 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5483] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.794259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGACG CCAACACAGC ACAAAACCCA GCGCTACTCA CAGTCGGGTA CGAGGGTACT
GATCTGAGAC GATTTCTTGC GTGCCTTGAA CAATCTGGCG TTAAGACGCT TGTCGACGTG
CGAGAGCGGG CACAATCAAG AAAAAAGGGT TTCTCAAAGA CGGCTTTGGC CGAAGCTCTT
GCCGGGATCG GCATTCGATA TGTTCATCTC CGCGATCTTG GAGACCCCAA GCCCGGTCGC
GATGCCGCAA GAGCAGGCGA CTATGAGACC TTTCGTAAGG TCTTCACCTC TCACATGGAT
ACGGATGCAG CCAAATCTGC GCTTTCGGAA CTCGATACTC TGGCAAAGGA GGATCGAACC
TGTATCCTTT GCTTCGAGCG GTGCCACACC GAATGCCACC GGGCAATTGT GGCGACATAC
CTAAAAGAAC TATCGCCCTA TGATGTGGTT CACGTTGAAG TTTGA
|
|---|
| Protein sequence | MLDANTAQNP ALLTVGYEGT DLRRFLACLE QSGVKTLVDV RERAQSRKKG FSKTALAEAL
AGIGIRYVHL RDLGDPKPGR DAARAGDYET FRKVFTSHMD TDAAKSALSE LDTLAKEDRT
CILCFERCHT ECHRAIVATY LKELSPYDVV HVEV
|
|---|
| |