| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0583 |
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| Symbol | rplC |
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| ID | 3933025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 571210 |
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| End bp | 572082 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902929 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_508525 |
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| Protein GI | 89053074 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCT CTGGTGTAAT CGCGAAGAAG GTCGGGATGA CCCGCCTCTT CATGGAAGAC
GGAAAGCAGA TCCCTGTGAC CGTTCTTCAA TTGGATAAAC TGCAGGTTGT TGCCAAGAAA
ACGTCCGATT CCGACGGCTA TTCCGCCGTT CAGTTGGGGG CTGGTACGGC AAAGGCCAAG
CGGACGTCGG CGCCCATGCG TGGCGTGTTC GCAAAGGCCA GTGTGGAGCC CAAGCGCAAG
CTGGTGGAAT TCCGCGTGGA TGCCGATAAC CTCATCGAGG TTGGCGAGGA AATCATCGCC
GACCACTACT TTGAGGGTCA GTTCGTGGAC GTCACGGGCA CCTCGATCGG TAAGGGCTTC
CAGGGTGCCA TGAAGCGGCA CAACTTTGGC GGTCTGCGCG CATCGCACGG TGTGTCGATC
TCGCACCGCT CCCACGGCTC TACCGGTCAG TGTCAGGACC CTGGCCGCGT CTTCAAAGGT
AAGAAGATGG CAGGTCACAT GGGTGCGGCC CGTGTTACCA CGCAGAACCT TCAGATTGTG
CGCACGGATA CCGATCGCGG TCTGATCATG ATCAAGGGCG CGGTTCCCGG ATCGAAGGGC
GGTTGGGTGA CGGTCAAGGA TGCGGTGAAG AAGCCGTTCC CCGAGAACGC CATTCTGCCC
GCAGCCCTGG CCTCTGCCGC TGCTGAAGCC GCCAAGCAGG CGGAAGAAGC AGCCGCCGCC
GCCGCAGCCG AGGCCGAAGC AGAAGCAGCC CGTCTGGCAG AAGAGCAGGC AGCCGCCGAG
GCGGAATCCC TGGCCCAGGC CGAAGCTGAA ATCGCAGCAG AGGGCAGCGA CGCCGCCCCT
GAAGGCGATG CAGACAAGAA GGACGGTGAA TAA
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| Protein sequence | MLRSGVIAKK VGMTRLFMED GKQIPVTVLQ LDKLQVVAKK TSDSDGYSAV QLGAGTAKAK
RTSAPMRGVF AKASVEPKRK LVEFRVDADN LIEVGEEIIA DHYFEGQFVD VTGTSIGKGF
QGAMKRHNFG GLRASHGVSI SHRSHGSTGQ CQDPGRVFKG KKMAGHMGAA RVTTQNLQIV
RTDTDRGLIM IKGAVPGSKG GWVTVKDAVK KPFPENAILP AALASAAAEA AKQAEEAAAA
AAAEAEAEAA RLAEEQAAAE AESLAQAEAE IAAEGSDAAP EGDADKKDGE
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