| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0573 |
|---|
| Symbol | |
|---|
| ID | 3933015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 562557 |
|---|
| End bp | 563423 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637902919 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_508515 |
|---|
| Protein GI | 89053064 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAA ATCTGAAGGG TGCCCTGTTC ATGACGGGCT CCATGGCATC GTTTGTGTTG
AACGATGTGG TGATCAAGGT CCTGTCCGAT GACTTGCCGC TGTTCCAGAT CGTGTTCCTG
CGCGGCATCC TGACGACTGC GCTCTTGACC GCCACGGTGG CCGCCTTCGG TCAACTGAGT
TTCCGTGTCC CGCGCGGGGA TCGGGGCAAG GTTGTCCTGC GCACGATCTT TGAGATCGCG
GCGATGGTCA CGTTCCTGAC GGCCCTGATC AACATGCAGA TCGCCAATGC CACGGCGATC
CTGTCGGCAT TGCCCCTTGC CGTGACCCTG GGCGCGGCCC TGCTGTTCAA GGAACAGGTC
GGTTGGCGAC GGTGGAGCGC CATCTGCATC GGCGCGTTTG GCGTGTTGCT GATCGTCCAG
CCAGGGGCGG ACGGGTTCAA CGTCTACTCC CTTCTGGCGT TGATCACGGT TGTGCTGGTC
GCGGGCCGTG ACCTTGCAAC ACGCGGGTTT TCGACCGGGT TGCCGACCAT GACCGTCGCC
GTCATCACCG CCGCCGCCAT CTGTGTGTTC GGCGGTGTCA TGTCCCTGAC GGACGAGTGG
GTGAGACCCG CCCTCCCGCA CCTGCTTCTT CTGGCGGCCG CGTCGGTCTG TATCATCGGC
GGCTATGTCT TTTCCATCCT CGTGATGCGG GTGGGAGAGG TCGCCGTGAC GGCTCCGTTC
CGCTATACGT CGCTGGTGTT CGCGCTGGTT TTGGGATGGT TGGTTTTCGC GGAACTACCC
AACACCCTGG CCCTGTGCGG GGCGGCGATT GTTGTTGCGA CGGGCGTGTT CACGCTCATC
CGCGAAAGAC AGGTGAAACA TGGCTGA
|
|---|
| Protein sequence | MTPNLKGALF MTGSMASFVL NDVVIKVLSD DLPLFQIVFL RGILTTALLT ATVAAFGQLS
FRVPRGDRGK VVLRTIFEIA AMVTFLTALI NMQIANATAI LSALPLAVTL GAALLFKEQV
GWRRWSAICI GAFGVLLIVQ PGADGFNVYS LLALITVVLV AGRDLATRGF STGLPTMTVA
VITAAAICVF GGVMSLTDEW VRPALPHLLL LAAASVCIIG GYVFSILVMR VGEVAVTAPF
RYTSLVFALV LGWLVFAELP NTLALCGAAI VVATGVFTLI RERQVKHG
|
|---|
| |