| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0507 |
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| Symbol | ispH |
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| ID | 3932948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 502885 |
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| End bp | 503844 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902852 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_508449 |
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| Protein GI | 89052998 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA CGCCCAAGCC CCCACTGACC ATCTATCTCG CCGCCCCGCG CGGGTTCTGC
GCCGGTGTCG ACCGCGCCAT CAAGATCGTG GAGATGGCTC TGGAGAAATG GGGCGCGCCG
GTCTTTGTGC GGCACGAGAT TGTCCATAAC AAATACGTGG TCGATGACCT GAAAGCCAAA
GGCGCTGTGT TTGTAGAGGA GCTGTCGGAT TGCCCCGATG ACCGCCCGGT GATCTTCTCC
GCCCACGGTG TGCCCAAATC CGTGCCCCAG GCCGCCGCCG CGCGTCAGAT GGTCTATGTC
GATGCCACCT GCCCACTGGT CTCCAAGGTC CATATCGAGG CGCAGCGCCA CTCCGATAAC
GGCCTCCAGA TGGTCATGAT CGGCCATAAG GGCCACCCGG AGACCATTGG GACCATGGGT
CAGTTGCCCG ATGGCGAAGT GTTGCTGGTT GAAACGGTCG AGGATGTGGC GACGGTTGAG
GTGCGCGACC CGTCCAGGCT GGCATTTGTG ACGCAAACCA CCCTCTCCGT CGATGACACG
ATTGAGATTG TGGAGGCCCT CACCACCCGC TTCCCCGCCA TCGTCGGACC CCATAAGGAA
GACATCTGCT ACGCCACCAC CAACCGGCAA GAGGCGGTCA AAGCCATGGC CCCCAAGGCT
GAGGCGATGC TGGTCGTGGG CGCGCCCAAT TCCTCCAATT CCAAACGTCT GGTCGAGGTC
GGATCTCGCG CGGGCTGCGC CTATTCGCAA CTGGTCCAAC GTGCCGCCGA CATCGACTGG
CGCGCGTTAG GTGACATCAA AACGCTCGGC ATAACCGCGG GCGCATCGGC CCCCGAGGTT
CTGATCGAAG AGGTGATCCA GGCCTTTGAA GATCGGTTCG ACGTCACCCG CGAGTTGGTG
GAAACCGCCG TGGAGAACGT CGAATTCAAG GTGCCCCGCG TCCTGCGCGA GACGGCCTAG
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| Protein sequence | MTQTPKPPLT IYLAAPRGFC AGVDRAIKIV EMALEKWGAP VFVRHEIVHN KYVVDDLKAK
GAVFVEELSD CPDDRPVIFS AHGVPKSVPQ AAAARQMVYV DATCPLVSKV HIEAQRHSDN
GLQMVMIGHK GHPETIGTMG QLPDGEVLLV ETVEDVATVE VRDPSRLAFV TQTTLSVDDT
IEIVEALTTR FPAIVGPHKE DICYATTNRQ EAVKAMAPKA EAMLVVGAPN SSNSKRLVEV
GSRAGCAYSQ LVQRAADIDW RALGDIKTLG ITAGASAPEV LIEEVIQAFE DRFDVTRELV
ETAVENVEFK VPRVLRETA
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