| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0487 |
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| Symbol | |
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| ID | 3932928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 486583 |
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| End bp | 487590 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902832 |
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| Product | trans-hexaprenyltranstransferase |
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| Protein accession | YP_508429 |
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| Protein GI | 89052978 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGG ACACGCCAAC GCAGAAGCCC CACGACCGCC TGAGCGCTGC ACTGAAAGAT
GATCTGACGG CCGTGAACAC GCTGATCCGC GCGCGGATGG CTTCCAAACA CGCCCCTCGC
ATTCCAGAGG TCACGGCACA TCTGGTGGAG GCGGGCGGCA AGCGCATCCG GCCCATGCTA
ACGCTGGCCT GCGCGCGGCT GTGTGGCTAC TCCGGCGATG ATCACGTGAA ACTGGCCGCC
ACGGTAGAGT TCATTCACAC CGCGACCCTG CTGCACGACG ATGTGGTCGA TGAAAGCGAG
CAACGCCGGG GCCGCCCCAC GGCGAACCTG TTGTGGGACA ATCAATCCAG CGTGCTGGTG
GGCGATTACC TGTTCGCCCG CGCGTTCCAG TTGATGGTGG AGCCCGGCAA CCTGCGCGTC
CTCGACATCC TGTCAAACGC CGCCGCCACC ATTGCCGAAG GCGAAGTGCT GCAACTCACC
GTCGCCTCCA ACATCGAAAC GCCTGAGGAG ACGTATCTTC AGGTCATCCG GGGCAAAACC
GCCGCGCTGT TTGAAGCTGC CTGCGAAGTG GGCGGTGTTA TCGCCGGGCG TGACACGTTC
ATTATCCAGG CCCTCGCCAC CTATGGCGAC GGGTTGGGCG TGGCCTTCCA GATGGCCGAT
GACCTTCTGG ACTGGGGCGG CGTGGATGGC GGGGCACAAC TGGACAAGAA CATCGGCGAT
GACTTCCGGG AGCGGAAGAT GACCCTGCCC GTGATCCGGG CCATCGCGGC GGCAAACGGT
GATGAACGCG CCTTCTGGGC GCGCACCATC GGCAAGGGCG ATCAACGCGA CGGCGATCTT
GAACAGGCGC TTGATGTGTT GCAACGCCAT GGCACCCTCG CCAGCACGCG TGACGCGGCC
AATGACCACG TGGCACGCGC CAAAGCCGCC CTTACAAACC TGCCCGACGA TCCCCTTCGC
GACATGCTGG CCGATCTGGC AGATTACGTG GTGGCGCGCC TGAATTAG
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| Protein sequence | MSLDTPTQKP HDRLSAALKD DLTAVNTLIR ARMASKHAPR IPEVTAHLVE AGGKRIRPML
TLACARLCGY SGDDHVKLAA TVEFIHTATL LHDDVVDESE QRRGRPTANL LWDNQSSVLV
GDYLFARAFQ LMVEPGNLRV LDILSNAAAT IAEGEVLQLT VASNIETPEE TYLQVIRGKT
AALFEAACEV GGVIAGRDTF IIQALATYGD GLGVAFQMAD DLLDWGGVDG GAQLDKNIGD
DFRERKMTLP VIRAIAAANG DERAFWARTI GKGDQRDGDL EQALDVLQRH GTLASTRDAA
NDHVARAKAA LTNLPDDPLR DMLADLADYV VARLN
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