Gene Jann_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0476 
Symbol 
ID3932917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp473395 
End bp474120 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID637902821 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_508418 
Protein GI89052967 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACGA TCCGTTCCTT CCTTCACATC GTGCAGATGT ATGTTGCGAT GCTGATCATC 
GCCGTGGTCT TTTTCCCTTG GGCTTTGTTC AGCCCGCGCG GGGCCCATGC GGCCTGTCAC
ACCTATTGCG CTTGGGTCTT CTGGACCCTG CGCTGGATGG TTGGGCTGCG CGTCGAGGTG
CGGGGCACCC CTCCTACGGA TGAAGTCCTT GTGGCCGCGA AGCATCAGAG CTTTCTGGAT
GTCATGGTCA TTTACCACGC CGTCCCGCGG GGCAAGTTCA TCATGAAGCG AGAGCTGATG
TTCGCCCCTT TCCTGGGACA ATACGGGCTG CGCATTGGCT GTGTTCCCGT GAACCGAGGC
AAACGCGGCG CGGCGATCAA GAAAATGCTG GAGGATGTGC GCAGCGGAAA GCAGCAGGGC
GGGCAGCTGA TCATCTATCC CCAAGGCACC CGCATAGCGC CCGGCGTCTC GGCCCCCTAC
AAGGCGGGCA CTGGCGCGCT CTATGCGCAA ATGGGCCAAC CCTGCGTGCC TGTGGCCACC
AATATCGGGG TCTTTTGGCC CAAGACGGGC ATCACCCGCA AACCCGGCGT GGCAGTGGTC
GACTTCCTGC CCCGGATCGA ACCCGGGATG GAGGCGAAAC CGTTCCTGGA CCGGCTGGAA
CATGACATTG AGACCGCCAG CAACGCGCTG CTGGACGAAG CGGGGTTTCG GAGGGATGAG
ACATGA
 
Protein sequence
MQTIRSFLHI VQMYVAMLII AVVFFPWALF SPRGAHAACH TYCAWVFWTL RWMVGLRVEV 
RGTPPTDEVL VAAKHQSFLD VMVIYHAVPR GKFIMKRELM FAPFLGQYGL RIGCVPVNRG
KRGAAIKKML EDVRSGKQQG GQLIIYPQGT RIAPGVSAPY KAGTGALYAQ MGQPCVPVAT
NIGVFWPKTG ITRKPGVAVV DFLPRIEPGM EAKPFLDRLE HDIETASNAL LDEAGFRRDE
T