| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0459 |
|---|
| Symbol | |
|---|
| ID | 3932900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 460789 |
|---|
| End bp | 461271 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637902804 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_508401 |
|---|
| Protein GI | 89052950 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGAG AAATCACCAA AGAGGTGGAG TTGGACGCGA TGGATGTCGC GATCCTGCAG
GCATTGCAGC GGCAGGGCCG AATAACCCAT GCGGATCTGT CGGAGAAGGT GAATCTGTCG
CCCTCGGCCT GCCACAGACG GGTTCAGCGG CTGGAGGCGT CTGGCGTAAT CCGCGACTAC
GTAGCGTTGG TGAGCCCGCG TGCGGTAGGG CGGGTGACAA CGGTGTTTGT GGAGATCAAA
TTGCAGGGTC AATCCGATGA GACGTTCGAT GCGTTCGAGA AGGCGGTGGC CCGTGTGCCG
GATGTGTTGG AGTGTCACCT GATGGCGGGC TCCGCCGACT ACCTCCTGAA GGTTGTCGCG
CGCGATTCTG AGGATTTTGC GCGCATCCAT CGCCAGCATT TGGCGCGGCT CCCCGGTGTG
GCGCAGTTGC AGTCGAGCTT TGCGTTGAAG ACGGTGTTCA AGACGACCGC TTTGCCCGTG
TAG
|
|---|
| Protein sequence | MTREITKEVE LDAMDVAILQ ALQRQGRITH ADLSEKVNLS PSACHRRVQR LEASGVIRDY
VALVSPRAVG RVTTVFVEIK LQGQSDETFD AFEKAVARVP DVLECHLMAG SADYLLKVVA
RDSEDFARIH RQHLARLPGV AQLQSSFALK TVFKTTALPV
|
|---|
| |