| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0427 |
|---|
| Symbol | |
|---|
| ID | 3932868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 430047 |
|---|
| End bp | 431228 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637902772 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_508369 |
|---|
| Protein GI | 89052918 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTTCC CTGAGCGGTT TTCGAACCTC CCAGACTATG CGTTTCCGCG TTTGCGGACC
CTTTTGGATT CCCATGAACC GGGCGCCGAG CCGATTGCCA TGACCATTGG CGAGCCGCGC
CATGATTTTC CGCCTTGGAT CGCAGAGATC ATTGGGCAGA ACCTCCACGG TTTTGGAAAA
TACCCCGAAA ACGATGGCAC GTTGTCACTG CGCACGGCGC AGGCGGATTG GCTGGGGCGG
CGGTATGGCG TGGATGTTGA TCCGGCGCGG CAGATCCTCG CTTTGAACGG CACGCGGGAG
GGCTTGTATA ATGCCTGCAT GTCGCTGTGC CCTGAGCGCA AGAACGGCCA AAAGCCCGTG
GTTCTGACGC CCAATCCGTT CTATCAGGTG TATGCCGTCG CGGCTTTGTC CGTGGGCGCG
GAGCCGATTT ACCTGCCCGC CACGGAAGCC ACTGGAGATC TGCCGGATTT CCACGCCGTG
GACCCTGCGA TCCTGGATCG CACGGCCATT GCCTACATCT GTTCCCCCGC GAACCCGCAG
GGCGCCGTGG CGTCTGAGGC CTATTGGGAA GGCCTGATTG CGCTGGCCGA GCAGCATGAT
TTCAAGATCT TCGCTGATGA ATGCTATTGT GAAATCTACC GCGATAGCCC GCCCCCGGGT
GCTTTGGAGA TTGCGCACAA GATGGGTGCG GACCCGGAAC GGGTGATGGT GTTTCACTCG
CTCTCCAAAC GCTCCAATCT GCCCGGATTG CGCAGCGGCT TTTGCGCGGG TGGCCCAGAG
AGTATCGCGC GGATGAAGAC CTTGCGCGCC TATGCCGGTG CGCCCCTGCC GATGCCCCTG
CAGGCGGTGG CAGAGGCGGT TTGGACCGAT GAGGATCACG TCATCGACAA CCGCAACCTT
TACCGGGTGA AATACAAGAT TGCCGACGAC ATCCTTGGTG ATGTCCAGGG CTACAAGGGC
CCCGAGGCGG GGTTTTTCCT GTGGCTTCCG GTCCAGGATG CGGAACAAGC CACATTGAAA
CTGTGGCAAG AGACCGGCGT GCGTGTGCTG CCCGGATCCT ATCTCGCGCG CGAAGTGGAC
GGGGTGACCC CCGGCCACGA CAAGATCCGC GTCGCGATGG TTGCTGAAAA AGAAGAAATG
CGTCGGGGGC TGAAAACGCT CCGCAAGACG CTGTATGAGT GA
|
|---|
| Protein sequence | MVFPERFSNL PDYAFPRLRT LLDSHEPGAE PIAMTIGEPR HDFPPWIAEI IGQNLHGFGK
YPENDGTLSL RTAQADWLGR RYGVDVDPAR QILALNGTRE GLYNACMSLC PERKNGQKPV
VLTPNPFYQV YAVAALSVGA EPIYLPATEA TGDLPDFHAV DPAILDRTAI AYICSPANPQ
GAVASEAYWE GLIALAEQHD FKIFADECYC EIYRDSPPPG ALEIAHKMGA DPERVMVFHS
LSKRSNLPGL RSGFCAGGPE SIARMKTLRA YAGAPLPMPL QAVAEAVWTD EDHVIDNRNL
YRVKYKIADD ILGDVQGYKG PEAGFFLWLP VQDAEQATLK LWQETGVRVL PGSYLAREVD
GVTPGHDKIR VAMVAEKEEM RRGLKTLRKT LYE
|
|---|
| |