| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0417 |
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| Symbol | |
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| ID | 3932858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 420512 |
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| End bp | 421198 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637902762 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_508359 |
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| Protein GI | 89052908 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAACC TCAAGAAAAT CCTTCTGGTC GATGACGAAG ATGACCTGCG CGAAGCGCTC
AGTGAACAGC TTGTGATGAC CGAGGACTTC GATGTGTTCG AGGCGGCCAA TGGCGCCCAG
GCGATGGAGC GTGCAAAGGA AGGGATCTAC GATCTCGTTA TCCTCGACGT GGGCCTGCCC
GATACCGATG GCCGTGAGCT GTGCCGCCTG ATGCGCAAGC AGGGCGTGAA ATGCCCGGTT
CTGATGCTGA CGGGTCATGA CAGTGACGCC GACACGATCC TTGGTCTGGA TGCCGGGGCC
AACGATTATG TCACCAAACC CTTCCGTTTT CCGGTGCTTC TGGCCCGTAT CCGCGCGCAA
CTACGCCAGC ATGAGCAGTC TGAGGATGCC GTCTTCCAAC TGGGGCCGTA CACGTTCAAG
CCCGCCATGA AGATGCTGAT CACCGAGGAC GAGCGGAAGA TCCGCCTGAC CGAGAAAGAG
ACCAACATCC TCAAGTTCCT CTACCGTGCC CAGGATGGCG TCGTCGCCCG TGACGTGCTG
CTGCATGAGG TTTGGGGCTA CAATGCCGGT GTCACGACCC ACACGTTGGA GACGCATATT
TACCGTCTTC GCCAGAAAAT TGAGCCAGAT CCGTCCAATG CCCGCCTTCT TGTGACCGAA
TCTGGTGGGT ATCGTCTGGT GGCGTAA
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| Protein sequence | MANLKKILLV DDEDDLREAL SEQLVMTEDF DVFEAANGAQ AMERAKEGIY DLVILDVGLP
DTDGRELCRL MRKQGVKCPV LMLTGHDSDA DTILGLDAGA NDYVTKPFRF PVLLARIRAQ
LRQHEQSEDA VFQLGPYTFK PAMKMLITED ERKIRLTEKE TNILKFLYRA QDGVVARDVL
LHEVWGYNAG VTTHTLETHI YRLRQKIEPD PSNARLLVTE SGGYRLVA
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